RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RNF122Q9H9V4 155 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 MBD1Q9UIS9 605 aaPredicted RBP14.05□□□□□ -0.16
SSRP1-202ENST00000293880 CES1P1Q9UKY3 287 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 OR2W1Q9Y3N9 320 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 INSIG2Q9Y5U4 225 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 NDUFB4O95168 129 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 SRD5A2P31213 254 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 TMEM91Q6ZNR0 172 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 GPBAR1Q8TDU6 330 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 IGHV1OR15-9A0A0B4J2B8 117 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 LINC00862A6NCI5 91 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 CD3EP07766 207 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 ADTRPQ96IZ2 230 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 GPR35Q9HC97 309 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 TYMSP04818 313 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 IGHV4-34P06331 123 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 SGK494Q96LW2 274 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 SIRT4Q9Y6E7 314 aaPredicted RBP14.05□□□□□ -0.16
SSRP1-202ENST00000293880 IGLV3-16A0A075B6K0 115 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 IGKV3OR2-268A0A0C4DH90 116 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 GRIFINA4D1Z8 144 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 TMEM189A5PLL7 270 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 H3BTX0 84 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 ZNF735P0CB33 412 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 IL11RAQ14626 422 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 KIAA1644Q3SXP7 199 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 TMEM38BQ9NVV0 291 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 UQCR10Q9UDW1 63 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 DOCK2Q92608 1830 aa14.05□□□□□ -0.16
SSRP1-202ENST00000293880 C1QL1O75973 258 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 CA1P00915 261 aaPredicted RBP14.04□□□□□ -0.16
SSRP1-202ENST00000293880 KIR2DL1P43626 348 aaPredicted RBP14.04□□□□□ -0.16
SSRP1-202ENST00000293880 KIR2DL2P43627 348 aaPredicted RBP14.04□□□□□ -0.16
SSRP1-202ENST00000293880 ABHD14BQ96IU4 210 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 HMGA2P52926 109 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 MFAP2P55001 183 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 MDP1Q86V88 176 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 C9orf172C9J069 976 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 LINC01387J3KSC0 135 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 BGLAPP02818 100 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 RASL10BQ96S79 203 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 DERL1Q9BUN8 251 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 ZNF665Q9H7R5 613 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 MPC1Q9Y5U8 109 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 CCL4P13236 92 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 NUBP1P53384 320 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 ST6GALNAC2Q9UJ37 374 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 PAPPA2Q9BXP8 1791 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 TMEM238LA0A1B0GVL6 79 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 A6NJY4 79 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 SYNGR1O43759 233 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 SCAND1P57086 179 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 PSG6Q00889 435 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 STPG2Q8N412 459 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 PARLQ9H300 379 aa14.04□□□□□ -0.16
SSRP1-202ENST00000293880 NANOS3P60323 173 aaKnown RBP14.03□□□□□ -0.16
SSRP1-202ENST00000293880 TGIF1Q15583 401 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 GGACTQ9BVM4 153 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 SCN9AQ15858 1988 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 J3QR06 171 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 GUCD1Q96NT3 240 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 SLC25A33Q9BSK2 321 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 RNF7Q9UBF6 113 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 PXMP4Q9Y6I8 212 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 KIR3DL2P43630 455 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 OR2A4O95047 310 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 REG1AP05451 166 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 ROM1Q03395 351 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 HCP5Q6MZN7 132 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 OR2A7Q96R45 310 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 RBKSQ9H477 322 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 LHX9Q9NQ69 397 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 COL22A1Q8NFW1 1626 aaPredicted RBP14.03□□□□□ -0.16
SSRP1-202ENST00000293880 KBTBD11O94819 623 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 C12orf54Q6X4T0 127 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 BHLHA9Q7RTU4 235 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 OR10S1Q8NGN2 331 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 CHRNA10Q9GZZ6 450 aa14.03□□□□□ -0.16
SSRP1-202ENST00000293880 ELF5Q9UKW6 265 aaPredicted RBP14.03□□□□□ -0.16
SSRP1-202ENST00000293880 ZIC3O60481 467 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 LOXL3P58215 753 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 HERPUD1Q15011 391 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 PUSL1Q8N0Z8 303 aaKnown RBP14.02□□□□□ -0.16
SSRP1-202ENST00000293880 MTURNQ8N3F0 131 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 PLAURQ03405 335 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 DEGS2Q6QHC5 323 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 C14orf144Q96I85 54 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 WNT10AQ9GZT5 417 aa14.02□□□□□ -0.16
SSRP1-202ENST00000293880 SLC25A10Q9UBX3 287 aaPredicted RBP14.02□□□□□ -0.16
SSRP1-202ENST00000293880 CLDN14O95500 239 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF764Q96H86 408 aaPredicted RBP14.02□□□□□ -0.17
SSRP1-202ENST00000293880 PGLYRP3Q96LB9 341 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 HOXA6P31267 233 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 MMDQ15546 238 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 GHITMQ9H3K2 345 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 KLF4O43474 513 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms