RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CD226Q15762 336 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF766Q5HY98 468 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZBTB34Q8NCN2 500 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 KCNMB2Q9Y691 235 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 SIRT4Q9Y6E7 314 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 NCOR2Q9Y618 2525 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 CFDP00746 253 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 RBP4P02753 201 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ATP1A1-AS1Q5TC04 95 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 PDPNQ86YL7 162 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 VN1R17PQ8TDU5 208 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ADAMTS17Q8TE56 1095 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 KLF7O75840 302 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 PRSS1P07477 247 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 MMP9P14780 707 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 GNRHR2Q96P88 292 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 ELOVL1Q9BW60 279 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR6C3Q9NZP0 311 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 IGSF23A1L1A6 192 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 DIRC3C9JPN6 131 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 HAND1O96004 215 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MT-ND6P03923 174 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 HSPB1P04792 205 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 SRD5A2P31213 254 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 BRS3P32247 399 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 RIGQ13278 110 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 BPIFA4PQ86YQ2 179 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 R3HDM4Q96D70 268 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 SEC16AO15027 2179 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MPTX1A8MV57 137 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 PTP4A3O75365 173 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 FSTP19883 344 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 SUCLG1P53597 346 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 ACER2Q5QJU3 275 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 FAM219AQ8IW50 185 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 RGP1Q92546 391 aaPredicted RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 HSD17B10Q99714 261 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 TXNDC17Q9BRA2 123 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 LIPT2A6NK58 231 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 CORTO00230 105 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 ISLRO14498 428 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 TCF21O43680 179 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 IER3P46695 156 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 RAC3P60763 192 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 PSG5Q15238 335 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 CYB561D1Q8N8Q1 229 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 BLNKQ8WV28 456 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 SF3B5Q9BWJ5 86 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 HELTA6NFD8 242 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 SMPD2O60906 423 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 CXorf1O96002 111 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 UMODP07911 640 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 COX6A1P12074 109 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 DDTP30046 118 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 NHLRC3Q5JS37 347 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 C1QL3Q5VWW1 255 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 WFDC8Q8IUA0 241 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MISP3Q96FF7 219 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZFP64Q9NPA5 681 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 WASHC3Q9Y3C0 194 aa10.29□□□□□ -0.76
SYNGAP1-201ENST00000293748 LOC102723996A0A087X1L8 192 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 CXorf65A6NEN9 183 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 DEFB108AA8MXU0 73 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 WDFY1Q8IWB7 410 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR2V2Q96R30 315 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 CHST5Q9GZS9 411 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 GAL3ST2Q9H3Q3 398 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 PRORYQ9H606 182 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 MYOZ1Q9NP98 299 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 HSF4Q9ULV5 492 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR2W1Q9Y3N9 320 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 CYR61O00622 381 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 NTN1O95631 604 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 P01737 135 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 CSN3P07498 182 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 FAM157CP0CG43 387 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 ACAA2P42765 397 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR4P4Q8NGL7 312 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 SGMS2Q8NHU3 365 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMEM204Q9BSN7 226 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 DMRT1Q9Y5R6 373 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 TRGV5A0A0B4J1U4 118 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 hADV38S2A0JD32 116 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 M0QZ24 198 aa10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 HIST1H1EP10412 219 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-201ENST00000293748 SRP14P37108 136 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms