RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ARG1P05089 322 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
PTCD1-201ENST00000292478 DCAF12L2Q5VW00 463 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM252Q8N6L7 170 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF488Q96MN9 340 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 LINC00470Q9BZP3 86 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 SPINK4O60575 86 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF205O95201 554 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 UCP3P55916 312 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 AQP10Q96PS8 301 aa11.06□□□□□ -0.64
PTCD1-201ENST00000292478 SEMA7AO75326 666 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 BCL2P10415 239 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 MPV17P39210 176 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 RTP5Q14D33 572 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 SPSB2Q99619 263 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 TUBD1Q9UJT1 453 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
PTCD1-201ENST00000292478 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF716A6NP11 495 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 CORTO00230 105 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 SMIM6P0DI80 62 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 Q96M66 194 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 GDF15Q99988 308 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM45BQ96B21 275 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 GSX1Q9H4S2 264 aaPredicted RBP11.05□□□□□ -0.64
PTCD1-201ENST00000292478 TRAV39A0A0B4J263 110 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 PTBP3O95758 552 aaKnown RBP11.05□□□□□ -0.64
PTCD1-201ENST00000292478 P2RY4P51582 365 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 LOC285556D6RIA3 1793 aa11.05□□□□□ -0.64
PTCD1-201ENST00000292478 RALGAPA2Q2PPJ7 1873 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM14DPA8MWL7 114 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 CTSSP25774 331 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 CAMPP49913 170 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 NPAS1Q99742 590 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 TMEM191AQ9H0A3 160 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 IL19Q9UHD0 177 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF253O75346 499 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 FOXL2P58012 376 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 SELENOTP62341 195 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
PTCD1-201ENST00000292478 TREM2Q9NZC2 230 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 OR5AC2Q9NZP5 309 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 FAM157AC9JC47 383 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 CCL21O00585 134 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 ISLRO14498 428 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 SMPD2O60906 423 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 COL8A1P27658 744 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 CBLN2Q8IUK8 224 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 EIF4E3Q8N5X7 224 aaKnown RBP11.04□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 EGR4Q05215 589 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 ELOBQ15370 118 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 LRP11Q86VZ4 500 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 CALHM1Q8IU99 346 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 C11orf42Q8N5U0 333 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 OR2V2Q96R30 315 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 OPN3Q9H1Y3 402 aaPredicted RBP11.04□□□□□ -0.64
PTCD1-201ENST00000292478 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 PLXNA1Q9UIW2 1896 aa11.04□□□□□ -0.64
PTCD1-201ENST00000292478 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SPINK2P20155 84 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 DPF1Q92782 380 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 PCM1Q15154 2024 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 PTPRFP10586 1907 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 M0R2Z0 102 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 HSPB1P04792 205 aaKnown RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 NMBP08949 121 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SCTP09683 121 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SP9P0CG40 484 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 COMPP49747 757 aaPredicted RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 LHFPL5Q8TAF8 219 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 HIGD1AQ9Y241 93 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 A0A1W2PP11 408 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 F5H697 171 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 NPIPB9F8W1W9 429 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 FAM87AP0C7U9 286 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SRP14P37108 136 aaKnown RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SNAI3Q3KNW1 292 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 ZNF660Q6AZW8 331 aaPredicted RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 WNT5BQ9H1J7 359 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 CDK2AP1O14519 115 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 LSM10Q969L4 123 aaKnown RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 IGKV3D-11A0A0A0MRZ8 115 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 HKR1P10072 659 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 SELENOHQ8IZQ5 122 aaKnown RBP11.03□□□□□ -0.64
PTCD1-201ENST00000292478 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
PTCD1-201ENST00000292478 P2RX4Q99571 388 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms