RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 MAS1LP35410 378 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 METTL1Q9UBP6 276 aaKnown RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 HYPMO75409 117 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 SMIM10L1P0DMW3 83 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 JOSD1Q15040 202 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 SMIM10Q96HG1 83 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 GPR132Q9UNW8 380 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 A0A087X0M5 115 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 A0A1B0GX30 115 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 WIPI1Q5MNZ9 446 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 LYPD8Q6UX82 237 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 IGHV5-10-1A0A0J9YXX1 117 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 C19orf48Q6RUI8 117 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 RBPMS2Q6ZRY4 209 aaKnown RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 GAPTQ8N292 157 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 KIAA1324LA8MWY0 1029 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
SEC16A-202ENST00000290037 FAM166AQ6J272 317 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 RBP4P02753 201 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 SPACA5Q96QH8 159 aa12.87□□□□□ -0.35
SEC16A-202ENST00000290037 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 BMPR1BO00238 502 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 F2RL2O00254 374 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 GBGT1Q8N5D6 347 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 CBR1P16152 277 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 ANKRD10Q9NXR5 420 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 DANCRP0C864 163 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 DHRS11Q6UWP2 260 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 SFTPA2Q8IWL1 248 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF441Q8N8Z8 693 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 DNASE2BQ8WZ79 361 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 KIR2DL2P43627 348 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 HIST1H2BAQ96A08 127 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 HARBI1Q96MB7 349 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 CDX2Q99626 313 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 FAM106CPP0CH98 169 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 Q1RN00 199 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 AMMECR1LQ6DCA0 310 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 C9orf40Q8IXQ3 194 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 MRPL52Q86TS9 123 aaKnown RBP12.86□□□□□ -0.35
SEC16A-202ENST00000290037 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
SEC16A-202ENST00000290037 SNRNP200O75643 2136 aaKnown RBP12.85□□□□□ -0.35
SEC16A-202ENST00000290037 PI3P19957 117 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 CACNG8Q8WXS5 425 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 OR4C13Q8NGP0 309 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF714Q96N38 554 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 NCOR1O75376 2440 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 RLFQ13129 1914 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 MVDP53602 400 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 SLC35E4Q6ICL7 350 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 RTN4RL2Q86UN3 420 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF260Q3ZCT1 412 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 PRSS27Q9BQR3 290 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 G6PC2Q9NQR9 355 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 IGHV3-9P01782 118 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-202ENST00000290037 FAM214BQ7L5A3 538 aa12.85□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF501Q96CX3 271 aaPredicted RBP12.85□□□□□ -0.35
SEC16A-202ENST00000290037 SF3B6Q9Y3B4 125 aaKnown RBP12.85□□□□□ -0.35
SEC16A-202ENST00000290037 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 ZNF738Q8NE65 137 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 TRGV8A0A0C4DH27 118 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 NPIPB6E9PJ23 425 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 GATAD1Q8WUU5 269 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 J3QR06 171 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 RELQ04864 619 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-202ENST00000290037 DUSP2Q05923 314 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 LPAL2Q16609 132 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-202ENST00000290037 DNM1P46Q6ZS02 220 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 STARD6P59095 220 aa12.84□□□□□ -0.35
SEC16A-202ENST00000290037 RPL8P62917 257 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms