RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TMEM171Q8WVE6 324 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 MPC1Q9Y5U8 109 aa13.56□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF503-AS2A6NEH8 195 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 ETV2O00321 342 aaPredicted RBP13.55□□□□□ -0.24
SMAD6-201ENST00000288840 NTN3O00634 580 aaPredicted RBP13.55□□□□□ -0.24
SMAD6-201ENST00000288840 DEFA4P12838 97 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 FAM53AQ6NSI3 398 aaPredicted RBP13.55□□□□□ -0.24
SMAD6-201ENST00000288840 SCCPDHQ8NBX0 429 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 RPRMQ9NS64 109 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
SMAD6-201ENST00000288840 COL6A3P12111 3177 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 J3QT63 122 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 PSMB3P49720 205 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 EIF3IQ13347 325 aaKnown RBP13.55□□□□□ -0.24
SMAD6-201ENST00000288840 OR4A16Q8NH70 328 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 C1QTNF5Q9BXJ0 243 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 IGHV3OR15-7A0A075B7D8 119 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 LHX2P50458 406 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 LINC00205P59089 165 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 TMEM37Q8WXS4 190 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 C18orf12Q96KH6 178 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 DCTN5Q9BTE1 182 aa13.55□□□□□ -0.24
SMAD6-201ENST00000288840 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 RNF212BA8MTL3 300 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 CA11O75493 328 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 LY86O95711 162 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 FAM209BQ5JX69 171 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-201ENST00000288840 DEFB124Q8NES8 71 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 ZPBPQ9BS86 351 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 PLA2G2EQ9NZK7 142 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 M0R1B8 84 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 SPINT2O43291 252 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 HAND1O96004 215 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 GPR12P47775 334 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 IL24Q13007 206 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 H7BYZ3 331 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 CRYAAP02489 173 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 TRGC2P03986 189 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 MMP7P09237 267 aaPredicted RBP13.54□□□□□ -0.24
SMAD6-201ENST00000288840 EGR1P18146 543 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 FFAR4Q5NUL3 377 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 OR4C12Q96R67 309 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 TOLLIPQ9H0E2 274 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 PRO1933Q9H354 126 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 TP53TG5Q9Y2B4 290 aa13.54□□□□□ -0.24
SMAD6-201ENST00000288840 COLCA2A8K830 154 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 M0R1X1 148 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 AP4M1O00189 453 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 PITX3O75364 302 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF737O75373 536 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 CHRNA7P36544 502 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 CLDN18P56856 261 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 FOXO1Q12778 655 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 C1orf87Q8N0U7 546 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 SNX22Q96L94 193 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 A0A0G2JRQ6 117 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 CD5P06127 495 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 SELENOVP59797 346 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 ABLIM2Q6H8Q1 611 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF600Q6ZNG1 722 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 FGFRL1Q8N441 504 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 GINS3Q9BRX5 216 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 TMEM30CPA0ZSE6 113 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 CD55P08174 381 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 RAB4BP61018 213 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 HABP2Q14520 560 aaPredicted RBP13.53□□□□□ -0.24
SMAD6-201ENST00000288840 NCR3LG1Q68D85 454 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 ZNF610Q8N9Z0 462 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 TMEM9BQ9NQ34 198 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 TECTAO75443 2155 aa13.53□□□□□ -0.24
SMAD6-201ENST00000288840 PQLC2LA1A4F0 135 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 LINC01387J3KSC0 135 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 HERPUD1Q15011 391 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 LRRC29Q8WV35 223 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 FAM210BQ96KR6 192 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 TCEAL7Q9BRU2 100 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 VSIRQ9H7M9 311 aa13.52□□□□□ -0.24
SMAD6-201ENST00000288840 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 KIAA1324LA8MWY0 1029 aaPredicted RBP13.52□□□□□ -0.25
SMAD6-201ENST00000288840 TAS2R30P59541 319 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 CA5BP1Q8WTZ4 195 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 OR5P3Q8WZ94 311 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 GAR1Q9NY12 217 aaKnown RBP13.52□□□□□ -0.25
SMAD6-201ENST00000288840 SSTR5P35346 364 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 POM121L2Q96KW2 1035 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 SSX3Q99909 188 aa13.52□□□□□ -0.25
SMAD6-201ENST00000288840 PATZ1Q9HBE1 687 aaKnown RBP13.52□□□□□ -0.25
SMAD6-201ENST00000288840 CEACAM18A8MTB9 384 aa13.51□□□□□ -0.25
SMAD6-201ENST00000288840 S100A8P05109 93 aa13.51□□□□□ -0.25
SMAD6-201ENST00000288840 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
SMAD6-201ENST00000288840 SLC25A6P12236 298 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms