RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RFESDQ8TAC1 157 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 RCC1LQ96I51 464 aaKnown RBP11.48□□□□□ -0.57
SCAF4-201ENST00000286835 MSL2Q9HCI7 577 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 PAGE4O60829 102 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 NGFP01138 241 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 LAMA1P25391 3075 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 CACNA1BQ00975 2339 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 MSMO1Q15800 293 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR10P1Q8NGE3 313 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 MRPL30Q8TCC3 161 aaKnown RBP11.47□□□□□ -0.57
SCAF4-201ENST00000286835 IL22RA2Q969J5 263 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 GABRA2P47869 451 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR1C1Q15619 314 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 FAM58AQ8N1B3 248 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR10G9Q8NGN4 311 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR10G7Q8NGN6 311 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM54Q969K7 222 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OR2W1Q9Y3N9 320 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 MYO15AQ9UKN7 3530 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 B4DEV8 164 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 ZIC3O60481 467 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
SCAF4-201ENST00000286835 DEFA4P12838 97 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 EDDM3BP56851 147 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 C3AR1Q16581 482 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 Q3ZCU0 254 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 OBP2BQ9NPH6 170 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 CLN8Q9UBY8 286 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
SCAF4-201ENST00000286835 A0A0G2JMM0 328 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 A0A1W2PPB8 328 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 A0A1W2PRS3 328 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 KIR3DP1A8MWS1 328 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 UCP3P55916 312 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 OR8G1Q15617 311 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-201ENST00000286835 BTNL3Q6UXE8 466 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 MRGPRGQ86SM5 289 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 KDF1Q8NAX2 398 aaPredicted RBP11.46□□□□□ -0.57
SCAF4-201ENST00000286835 C14orf144Q96I85 54 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 CDH20Q9HBT6 801 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 DEFB108AA8MXU0 73 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 SPINK4O60575 86 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 SSTP61278 116 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 SSPNQ14714 243 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 OR8B8Q15620 311 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 CHRNA10Q9GZZ6 450 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 TUBG2Q9NRH3 451 aa11.46□□□□□ -0.57
SCAF4-201ENST00000286835 DVL1O14640 695 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 COL10A1Q03692 680 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 EDDM3AQ14507 147 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 REC114Q7Z4M0 266 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 OR2T10Q8NGZ9 312 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 hCG_38984A0A1B0GV85 526 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 LRRC3CA6NJW4 275 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 G6PCP35575 357 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 TUSC5Q8IXB3 177 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 APH1AQ96BI3 265 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 GCM1Q9NP62 436 aa11.46□□□□□ -0.58
SCAF4-201ENST00000286835 LIN7CQ9NUP9 197 aaKnown RBP11.46□□□□□ -0.58
SCAF4-201ENST00000286835 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 CD55P08174 381 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 FOXO1Q12778 655 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 LRTM2Q8N967 370 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ZIC4Q8N9L1 334 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 KLF13Q9Y2Y9 288 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 TRAPPC1Q9Y5R8 145 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 CTSSP25774 331 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 MEF2BQ02080 365 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 SLC25A53Q5H9E4 307 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ZNF573Q86YE8 665 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 OR1P1Q8NH06 330 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 OR4X1Q8NH49 305 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ELOVL1Q9BW60 279 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ZNF552Q9H707 407 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 NUP210LQ5VU65 1888 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 PPIHO43447 177 aaKnown RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 TGOLN2O43493 480 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 COX5AP20674 150 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
SCAF4-201ENST00000286835 FAM103A1Q9BTL3 118 aaKnown RBP11.45□□□□□ -0.58
SCAF4-201ENST00000286835 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms