RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF66Q6ZN08 573 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 C1orf210Q8IVY1 113 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 ZNF442Q9H7R0 627 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 LRP5LA4QPB2 252 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 M0QZK8 103 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 GGCTO75223 188 aaKnown RBP8.86□□□□□ -0.99
SKA1-201ENST00000285116 IFNA5P01569 189 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 OR4A8P0C604 315 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 FAM3BP58499 235 aaPredicted RBP8.86□□□□□ -0.99
SKA1-201ENST00000285116 DCAF10Q5QP82 559 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 THNSL2Q86YJ6 484 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 CALHM1Q8IU99 346 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 OR2V1Q8NHB1 315 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 ZNF665Q9H7R5 613 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 AKIRIN1Q9H9L7 192 aaPredicted RBP8.86□□□□□ -0.99
SKA1-201ENST00000285116 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 LAMP3Q9UQV4 416 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 ATP23Q9Y6H3 246 aa8.86□□□□□ -0.99
SKA1-201ENST00000285116 SLC22A20A6NK97 555 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 ADAM20O43506 726 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 TMEM50AO95807 157 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 B4GALT1P15291 398 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 ZNF154Q13106 437 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 P2RY6Q15077 328 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 MRPL52Q86TS9 123 aaKnown RBP8.85□□□□□ -0.99
SKA1-201ENST00000285116 MRPL41Q8IXM3 137 aaKnown RBP8.85□□□□□ -0.99
SKA1-201ENST00000285116 OR5B12Q96R08 314 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 PLK3Q9H4B4 646 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 RNF150Q9ULK6 438 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 KALRNO60229 2985 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 TMEM210A6NLX4 147 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 M0R296 226 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 NTN3O00634 580 aaPredicted RBP8.85□□□□□ -0.99
SKA1-201ENST00000285116 DLEU1O43261 78 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 IFNA1P01562 189 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 PAX9P55771 341 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 GAGE1Q13065 139 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 CEACAM16Q2WEN9 425 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 ACOT6Q3I5F7 207 aaPredicted RBP8.85□□□□□ -0.99
SKA1-201ENST00000285116 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 NCR3LG1Q68D85 454 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 SLC25A24Q6NUK1 477 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 ZNF818PQ6ZRF7 136 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 C16orf82Q7Z2V1 217 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 MRGPRGQ86SM5 289 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 C17orf78Q8N4C9 275 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 AGMATQ9BSE5 352 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 CBLN4Q9NTU7 201 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 GOLT1BQ9Y3E0 138 aa8.85□□□□□ -0.99
SKA1-201ENST00000285116 KMT2EQ8IZD2 1858 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 CD55P08174 381 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 IDH3GP51553 393 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 RSPO4Q2I0M5 234 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 CEACAM21Q3KPI0 293 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 WDR25Q64LD2 544 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 CYP2G1PQ6ZSU1 146 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 OR51G1Q8NGK1 321 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 RAB40CQ96S21 281 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 COL27A1Q8IZC6 1860 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 CCDC163A0A0D9SF12 145 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DL5BA0A0G2JN68 375 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DL5BA0A0G2JPC4 375 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 LRRC3CA6NJW4 275 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 KIAA1324LA8MWY0 1029 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 CHST1O43916 411 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 OR7C1O76099 320 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 ADIRFQ15847 76 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 CDCP2Q5VXM1 449 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 TEX38Q6PEX7 206 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 CENPVQ7Z7K6 275 aaPredicted RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 MKXQ8IYA7 352 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 KIR2DL5AQ8N109 375 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 GAPTQ8N292 157 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 FGFBP3Q8TAT2 258 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 PIGCQ92535 297 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 LSM10Q969L4 123 aaKnown RBP8.84□□□□□ -0.99
SKA1-201ENST00000285116 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 TAAR3PQ9P1P4 343 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 PRSS50Q9UI38 385 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 CEBPZOSA8MTT3 80 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 B4E171 279 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 H7BYZ3 331 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 JMJD7P0C870 316 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 TUBG1P23258 451 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 TSPAN7P41732 249 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 GALR1P47211 349 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 TMEM241Q24JQ0 296 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 LYSMD4Q5XG99 296 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 LCN15Q6UWW0 184 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 SMIM7Q9BQ49 75 aa8.84□□□□□ -0.99
SKA1-201ENST00000285116 P04436 131 aa8.83□□□□□ -1
SKA1-201ENST00000285116 RPLP1P05386 114 aaKnown RBP8.83□□□□□ -1
SKA1-201ENST00000285116 LINC00614P0C842 121 aa8.83□□□□□ -1
SKA1-201ENST00000285116 BCL3P20749 454 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms