RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 VAMP2P63027 116 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 HMGN3Q15651 99 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 BVESQ8NE79 360 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 STOML3Q8TAV4 291 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 RBMXL1Q96E39 390 aaKnown RBP15.02■□□□□ -0
CAPN1-201ENST00000279247 PHYHIPLQ96FC7 376 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 SLX1AQ9BQ83 275 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 WFDC1Q9HC57 220 aa15.02■□□□□ -0
CAPN1-201ENST00000279247 ANKHD1Q8IWZ3 2542 aaKnown RBP15.02■□□□□ -0
CAPN1-201ENST00000279247 ST8SIA5O15466 376 aa15.02□□□□□ -0.01
CAPN1-201ENST00000279247 TNFAIP6P98066 277 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-201ENST00000279247 BSPH1Q075Z2 132 aa15.02□□□□□ -0.01
CAPN1-201ENST00000279247 ZNF816Q0VGE8 651 aaPredicted RBP15.02□□□□□ -0.01
CAPN1-201ENST00000279247 CACNA1BQ00975 2339 aa15.02□□□□□ -0.01
CAPN1-201ENST00000279247 MED6O75586 246 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 APOC3P02656 99 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 TLNRD1Q9H1K6 362 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 BARX1Q9HBU1 254 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-201ENST00000279247 OOEPA6NGQ2 149 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 TMEM108Q6UXF1 575 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 Q6ZRM9 215 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 MRGPRGQ86SM5 289 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 FAM169BQ8N8A8 192 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 RNF141Q8WVD5 230 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 LEAP2Q969E1 77 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 GPR146Q96CH1 333 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 PSG11Q9UQ72 335 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 POMT1Q9Y6A1 747 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 AKAP6Q13023 2319 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 DPRXA6NFQ7 191 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 SRRM5B3KS81 715 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 CHST1O43916 411 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 SPIN2AQ99865 258 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 SPIN2BQ9BPZ2 258 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 PLEKHA2Q9HB19 425 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 CACNG5Q9UF02 275 aa15.01□□□□□ -0.01
CAPN1-201ENST00000279247 RAMP3O60896 148 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 TUBG1P23258 451 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 LMO1P25800 156 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 NMSQ5H8A3 153 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 OR5D13Q8NGL4 314 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 ZCCHC14Q8WYQ9 949 aaKnown RBP15□□□□□ -0.01
CAPN1-201ENST00000279247 SH3BGRL3Q9H299 93 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 TUBG2Q9NRH3 451 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 DYSFO75923 2080 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 C1QL1O75973 258 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 KRASP01116 189 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 IGKV1-39P01597 117 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 IGKV1D-39P04432 117 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 IAPPP10997 89 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 SHEQ5VZ18 495 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 SLC35E4Q6ICL7 350 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 UNQ6494/PRO21346Q6UXR6 183 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 GNG12Q9UBI6 72 aa15□□□□□ -0.01
CAPN1-201ENST00000279247 TMEM50AO95807 157 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 CRYZL1O95825 349 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 IGHV1-46P01743 117 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 FGF2P09038 288 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 MZT1Q08AG7 82 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 FGFRL1Q8N441 504 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 OR2C3Q8N628 320 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 A0A1W2PPE3 182 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 IGSF23A1L1A6 192 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 NUPL2O15504 423 aaKnown RBP14.99□□□□□ -0.01
CAPN1-201ENST00000279247 HOXD4P09016 255 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-201ENST00000279247 CD200P41217 278 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 FHITP49789 147 aa14.99□□□□□ -0.01
CAPN1-201ENST00000279247 EWSR1Q01844 656 aaKnown RBP eCLIP14.99□□□□□ -0.01
CAPN1-201ENST00000279247 GPR137BO60478 399 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 PVALBP20472 110 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-201ENST00000279247 RPL30P62888 115 aaKnown RBP14.98□□□□□ -0.01
CAPN1-201ENST00000279247 SRSF3P84103 164 aaKnown RBP14.98□□□□□ -0.01
CAPN1-201ENST00000279247 Q3ZCU0 254 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 RND1Q92730 232 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 NEUROG1Q92886 237 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 PLEKHF2Q9H8W4 249 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 FAM90A27PA6NNH2 459 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 OR4A8P0C604 315 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 DEFA5Q01523 94 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 PXDC1Q5TGL8 231 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 BPIFCQ8NFQ6 507 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 TCTEX1D2Q8WW35 142 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 C5orf30Q96GV9 206 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 GCM1Q9NP62 436 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 PLA2G2EQ9NZK7 142 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 TAAR5O14804 337 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 THBDP07204 575 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 FAM157CP0CG43 387 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 LPAR6P43657 344 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 RPS23P62266 143 aaKnown RBP14.98□□□□□ -0.01
CAPN1-201ENST00000279247 HNF4GQ14541 408 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 ZNF585BQ52M93 769 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 UTF1Q5T230 341 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 WFIKKN1Q96NZ8 548 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 FAM96BQ9Y3D0 163 aa14.98□□□□□ -0.01
CAPN1-201ENST00000279247 A8MXK9 166 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 ZNF737O75373 536 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 JTBO76095 146 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 GYPAP02724 150 aa14.97□□□□□ -0.01
CAPN1-201ENST00000279247 G6PCP35575 357 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms