RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 NSUN5P2Q63ZY6 315 aa9.73□□□□□ -0.85
USP6NL-201ENST00000277575 CCDC144NLQ6NUI1 221 aa9.73□□□□□ -0.85
USP6NL-201ENST00000277575 ZNF596Q8TC21 504 aa9.73□□□□□ -0.85
USP6NL-201ENST00000277575 ZNF714Q96N38 554 aa9.73□□□□□ -0.85
USP6NL-201ENST00000277575 ZNF586Q9NXT0 402 aa9.73□□□□□ -0.85
USP6NL-201ENST00000277575 GNG4P50150 75 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 GAMTQ14353 236 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SPNS3Q6ZMD2 512 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ZNF705AQ6ZN79 300 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 Q6ZT83 130 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ABHD14BQ96IU4 210 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 DLL3Q9NYJ7 618 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ZDHHC8Q9ULC8 765 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 CADP27708 2225 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 DUXBA0A1W2PPF3 345 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ZIC3O60481 467 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ZP3P21754 424 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 LGALSLQ3ZCW2 172 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 FAM162BQ5T6X4 162 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 OR1B1Q8NGR6 318 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 FLVCR1-AS1Q8TAF5 88 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 RHOVQ96L33 236 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SNX22Q96L94 193 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 HSBP1O75506 76 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 MBPP02686 304 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 UMODP07911 640 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 VSIG10L2P0DP72 767 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SUCLG1P53597 346 aaKnown RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SIGLECL1Q8N7X8 197 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 GP6Q9HCN6 339 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 PRUNE2Q8WUY3 3088 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 SEMA7AO75326 666 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 APELAP0DMC3 54 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 RCC1P18754 421 aaPredicted RBP9.72□□□□□ -0.85
USP6NL-201ENST00000277575 TNFSF10P50591 281 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 CLEC2AQ6UVW9 174 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 RNF2Q99496 336 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 LINC00470Q9BZP3 86 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 GPR132Q9UNW8 380 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 RNF115Q9Y4L5 304 aa9.72□□□□□ -0.85
USP6NL-201ENST00000277575 ODAMA1E959 279 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 SLC31A2O15432 143 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 ERVFRD-1P60508 538 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 MYPOPQ86VE0 399 aaPredicted RBP9.71□□□□□ -0.85
USP6NL-201ENST00000277575 GHITMQ9H3K2 345 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.85
USP6NL-201ENST00000277575 SMIM17P0DL12 118 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 TMEM54Q969K7 222 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 ZNF236Q9UL36 1845 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 HPRT1P00492 218 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 TMEM37Q8WXS4 190 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 TMEM18Q96B42 140 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 HSF4Q9ULV5 492 aa9.71□□□□□ -0.86
USP6NL-201ENST00000277575 SPINK4O60575 86 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 CEBPDP49716 269 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 B2MP61769 119 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 ZNF66Q6ZN08 573 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 OR8I2Q8N0Y5 310 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 OR4P4Q8NGL7 312 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■■■■ 26.8
USP6NL-201ENST00000277575 C9orf172C9J069 976 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 DNASE2O00115 360 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 ADAM11O75078 769 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 PSG5Q15238 335 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 ZNF658BQ4V348 819 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 DHRS7BQ6IAN0 325 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 SSX7Q7RTT5 188 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 MRGPRGQ86SM5 289 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 PDPNQ86YL7 162 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 GCSAMQ8N6F7 178 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 BVESQ8NE79 360 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 FAM103A1Q9BTL3 118 aaKnown RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 HEATR5BQ9P2D3 2071 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 A0A0G2JMM0 328 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 A0A1W2PPB8 328 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 A0A1W2PRS3 328 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 KIR3DP1A8MWS1 328 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 SEC14L6B5MCN3 397 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 RGS13O14921 159 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 TMEM255AQ5JRV8 349 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 HSD17B13Q7Z5P4 300 aaPredicted RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 IGKV1D-43A0A0B4J1Z2 117 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 NDUFA2O43678 99 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 GATCO43716 136 aaKnown RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 SYNGR3O43761 229 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 DAOP14920 347 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 NPBWR2P48146 333 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 ZFP36L1Q07352 338 aaKnown RBP9.7□□□□□ -0.86
USP6NL-201ENST00000277575 KLRB1Q12918 225 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 SHISA5Q8N114 240 aa9.7□□□□□ -0.86
USP6NL-201ENST00000277575 Q8WTZ3 238 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms