RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TNFAIP6P98066 277 aaPredicted RBP12.29□□□□□ -0.44
TMEM47-201ENST00000275954 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
TMEM47-201ENST00000275954 MOB3AQ96BX8 217 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 SH3BGRL3Q9H299 93 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 POMT1Q9Y6A1 747 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 KCNJ3P48549 501 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 CIB3Q96Q77 187 aaPredicted RBP12.29□□□□□ -0.44
TMEM47-201ENST00000275954 KIAA1671Q9BY89 1806 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 RNF122Q9H9V4 155 aa12.29□□□□□ -0.44
TMEM47-201ENST00000275954 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF818PQ6ZRF7 136 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 NANPQ8TBE9 248 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 UHRF2Q96PU4 802 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF581Q9P0T4 197 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 CLN8Q9UBY8 286 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 HSF4Q9ULV5 492 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 H0YIZ8 118 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 ETV3LQ6ZN32 361 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
TMEM47-201ENST00000275954 C1orf87Q8N0U7 546 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 ACY3Q96HD9 319 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 TAAR6Q96RI8 345 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 TMEM222Q9H0R3 208 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 V9GYS6 101 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 CSRP1P21291 193 aaKnown RBP12.28□□□□□ -0.44
TMEM47-201ENST00000275954 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 CCL8P80075 99 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 ZNF273Q14593 569 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 SSX2Q16385 188 aa12.28□□□□□ -0.44
TMEM47-201ENST00000275954 WNT9BO14905 357 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 NAAAQ02083 359 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 TMEM41BQ5BJD5 291 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 NSUN5P2Q63ZY6 315 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 NCR3LG1Q68D85 454 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 KCNIP4Q6PIL6 250 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 ADAMTS17Q8TE56 1095 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 PRDM14Q9GZV8 571 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 LTBP2Q14767 1821 aa12.27□□□□□ -0.44
TMEM47-201ENST00000275954 IGLV3-32A0A0A0MS00 114 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 CRYBA1P05813 215 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 OR5G3P0C626 314 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 FAM166AQ6J272 317 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 POC1AQ8NBT0 407 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 DSPP15924 2871 aaKnown RBP12.27□□□□□ -0.45
TMEM47-201ENST00000275954 LOC390937A0A1W2PQ73 354 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 LRRC3CA6NJW4 275 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 CELA3BP08861 270 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 NAT2P11245 290 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 MDH2P40926 338 aaKnown RBP12.27□□□□□ -0.45
TMEM47-201ENST00000275954 IL24Q13007 206 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 INO80CQ6PI98 192 aaPredicted RBP12.27□□□□□ -0.45
TMEM47-201ENST00000275954 ZNF561Q8N587 486 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 AURKAIP1Q9NWT8 199 aaPredicted RBP12.27□□□□□ -0.45
TMEM47-201ENST00000275954 MTCH1Q9NZJ7 389 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 PROB1E7EW31 1015 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 CNIH1O95406 144 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 ACOT6Q3I5F7 207 aaPredicted RBP12.27□□□□□ -0.45
TMEM47-201ENST00000275954 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
TMEM47-201ENST00000275954 NCOA6Q14686 2063 aaPredicted RBP12.26□□□□□ -0.45
TMEM47-201ENST00000275954 E9PLN8 166 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 AQP10Q96PS8 301 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 PGLYRP1O75594 196 aaPredicted RBP12.26□□□□□ -0.45
TMEM47-201ENST00000275954 NEURL1O76050 574 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 SULT1A2P50226 295 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 KLF14Q8TD94 323 aaPredicted RBP12.26□□□□□ -0.45
TMEM47-201ENST00000275954 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 SEC11CQ9BY50 192 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 SEC11BP0C7V7 166 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 Q0VFX4 171 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 STUMQ69YW2 141 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 COMMD1Q8N668 190 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 Q9N2K0 584 aa12.26□□□□□ -0.45
TMEM47-201ENST00000275954 FGF2P09038 288 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 COL10A1Q03692 680 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 TMEM187Q14656 261 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 RTL8BQ17RB0 113 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 SSMEM1Q8WWF3 244 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 RNF126Q9BV68 326 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 HBZP02008 142 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 CD200P41217 278 aa12.25□□□□□ -0.45
TMEM47-201ENST00000275954 ZNF385CQ66K41 422 aaPredicted RBP12.25□□□□□ -0.45
TMEM47-201ENST00000275954 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms