RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 RAB35Q15286 201 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TOMM20LQ6UXN7 152 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZADH2Q8N4Q0 377 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A0U1RQK1 487 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 RPL23AP62750 156 aaKnown RBP12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TLE4Q04727 773 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 RTN4IP1Q8WWV3 396 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CYTL1Q9NRR1 136 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF716A6NP11 495 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A8MWP6 167 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 JTBO76095 146 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CD8AP01732 235 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR5AC1P0C628 307 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IAPPP10997 89 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CLEC18BQ6UXF7 455 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DIRC2Q96SL1 478 aa12.12□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 WNT5AP41221 380 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FAM3AP98173 230 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ADIRFQ15847 76 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 RSPO1Q2MKA7 263 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DEGS2Q6QHC5 323 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 LYZL2Q7Z4W2 148 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF695Q8IW36 515 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DEGS1O15121 323 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 BPNT1O95861 308 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CD82P27701 267 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PLA2G2CQ5R387 149 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 Q6ZVH6 145 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ADAMTS17Q8TE56 1095 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR5B12Q96R08 314 aa12.11□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF816-ZNF321PA0A0X1KG74 233 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A1W2PPQ1 181 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 DKK1O94907 266 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FCGR3AP08637 254 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 LHX2P50458 406 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FAM27E3Q08E93 113 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 HEPN1Q6WQI6 88 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 MRPL24Q96A35 216 aaKnown RBP12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 NAV2Q8IVL1 2488 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CST4P01036 141 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IGHMP01871 453 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TMEM18Q96B42 140 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 AADACL3Q5VUY0 350 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR13G1Q8NGZ3 307 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 MRGPRDQ8TDS7 321 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 THRSPQ92748 146 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SDSLQ96GA7 329 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TXN2Q99757 166 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ABHD14AQ9BUJ0 271 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 NCKAP5O14513 1909 aa12.1□□□□□ -0.47
TNFRSF11A-201ENST00000269485 TNRC6AQ8NDV7 1962 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 C21orf140B9A014 251 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CLDN18P56856 261 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 CCL8P80075 99 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 AESQ08117 197 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PRSS54Q6PEW0 395 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SCNM1Q9BWG6 230 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PNRC2Q9NPJ4 139 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 V9GYS6 101 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 ACANP16112 2415 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 APELAP0DMC3 54 aa12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 EIF3IQ13347 325 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 MRPL49Q13405 166 aaKnown RBP12.09□□□□□ -0.47
TNFRSF11A-201ENST00000269485 PEAR1Q5VY43 1037 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms