RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 UBE2G2P60604 165 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 ARL16Q0P5N6 197 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 ABCA11PQ4W5N1 156 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 TMEM41BQ5BJD5 291 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 PRR22Q8IZ63 422 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 BAHD1Q8TBE0 780 aaPredicted RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 BCL2L2Q92843 193 aaPredicted RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 SPACA9Q96E40 222 aaPredicted RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 UHRF2Q96PU4 802 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 PLEKHF2Q9H8W4 249 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 WIPI2Q9Y4P8 454 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 ADAM20O43506 726 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 CHST1O43916 411 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 ZNF737O75373 536 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 KBTBD11O94819 623 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 ZNF10P21506 573 aaPredicted RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 MTCP1P56278 107 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 UBE2NP61088 152 aaKnown RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 RPL27P61353 136 aaKnown RBP7.52□□□□□ -1.21
VAPB-201ENST00000265619 PDCD1Q15116 288 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 WBP2NLQ6ICG8 309 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 FAM89BQ8N5H3 189 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 WDYHV1Q96HA8 205 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 SVILO95425 2214 aa7.52□□□□□ -1.21
VAPB-201ENST00000265619 TRAV1-1A0A0B4J248 108 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ZNF850A8MQ14 1090 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 HBE1P02100 147 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 CLEC3BP05452 202 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 C1QTNF9P0C862 333 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 PSG4Q00888 419 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 HOXB13Q92826 284 aaPredicted RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 SARAFQ96BY9 339 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 DECR2Q9NUI1 292 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ANXA10Q9UJ72 324 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 DIRC3C9JPN6 131 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 PRSS12P56730 875 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 VAMP3Q15836 100 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ABHD12BQ7Z5M8 362 aaPredicted RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 WWTR1Q9GZV5 400 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 CLEC5AQ9NY25 188 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 IGHV3-20A0A0C4DH32 117 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 AHRRA9YTQ3 701 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ZNF20P17024 532 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 COL8A2P25067 703 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ZNF133P52736 654 aaPredicted RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 LCN12Q6JVE5 192 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 GUSBP11Q6P575 273 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 C1orf174Q8IYL3 243 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 SNIP1Q8TAD8 396 aaKnown RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 SIGLEC12Q96PQ1 595 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 ZNF430Q9H8G1 570 aaPredicted RBP7.51□□□□□ -1.21
VAPB-201ENST00000265619 CLN8Q9UBY8 286 aa7.51□□□□□ -1.21
VAPB-201ENST00000265619 OR2T8A6NH00 312 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ZNF891A8MT65 544 aaPredicted RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 PGCP20142 388 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 TSPOP30536 169 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ARR3P36575 388 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 GFRA1P56159 465 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 NXPH1P58417 271 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ZP4Q12836 540 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 PRDX4Q13162 271 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 FNDC7Q5VTL7 733 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 TMEM144Q7Z5S9 345 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 HAPLN4Q86UW8 402 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 SLC25A45Q8N413 288 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 C16orf52Q8NHV5 167 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ABHD3Q8WU67 409 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 NEUROG1Q92886 237 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 GNPNAT1Q96EK6 184 aaPredicted RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 SLC46A1Q96NT5 459 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 MEGF9Q9H1U4 602 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 MED29Q9NX70 200 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 A0A0G2JRQ6 117 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 CAPZBP47756 277 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 TPPP2P59282 170 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 RANP62826 216 aaKnown RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 MSMO1Q15800 293 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 TRIM61Q5EBN2 209 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 UEVLDQ8IX04 471 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 OR5AU1Q8NGC0 362 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 OR2V1Q8NHB1 315 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 KCNE4Q8WWG9 221 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ADIPOR1Q96A54 375 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 STARD4Q96DR4 205 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 TM4SF19Q96DZ7 209 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 A0A1W2PR77 199 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 NPIPA2E9PIF3 369 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 EPHA8P29322 1005 aaPredicted RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 MORN2Q502X0 79 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 CA13Q8N1Q1 262 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 ARHGEF39Q8N4T4 335 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 OR8B12Q8NGG6 310 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 MRPL30Q8TCC3 161 aaKnown RBP7.5□□□□□ -1.21
VAPB-201ENST00000265619 RCHY1Q96PM5 261 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms