RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CSRP2Q16527 193 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 OR1L8Q8NGR8 309 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 KLF14Q8TD94 323 aaPredicted RBP12.06□□□□□ -0.48
CDH3-201ENST00000264012 NPAS1Q99742 590 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 IGKV1D-43A0A0B4J1Z2 117 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 TMEM14DPA8MWL7 114 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 F2RL2O00254 374 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 CELA3AP09093 270 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 RAB5AP20339 215 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 TMEM222Q9H0R3 208 aa12.06□□□□□ -0.48
CDH3-201ENST00000264012 GPR179Q6PRD1 2367 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 IGLV3-12A0A075B6K2 115 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 H0Y980 276 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 AP4M1O00189 453 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 ADRA2AP08913 450 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 NHLH2Q02577 135 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 ZNF273Q14593 569 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 OR5AC2Q9NZP5 309 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 ARHGEF17Q96PE2 2063 aaPredicted RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 C11orf94C9JXX5 98 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 J3QR06 171 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 GOSR1O95249 250 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 P2RY4P51582 365 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 SUCLG1P53597 346 aaKnown RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 PNRC1Q12796 327 aaPredicted RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 OR4P4Q8NGL7 312 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 ACACAQ13085 2346 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 K7N7A8 449 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 PHOX2AO14813 284 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 ZIC3O60481 467 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 RCC1P18754 421 aaPredicted RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 SLC31A2O15432 143 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 HPRT1P00492 218 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 LGALS7P47929 136 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 B2MP61769 119 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 PSG5Q15238 335 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 LRRC75AQ8NAA5 344 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 RGP1Q92546 391 aaPredicted RBP12.05□□□□□ -0.48
CDH3-201ENST00000264012 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 RLFQ13129 1914 aa12.05□□□□□ -0.48
CDH3-201ENST00000264012 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 GNG7O60262 68 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 BMI1P35226 326 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 CEBPDP49716 269 aaPredicted RBP12.04□□□□□ -0.48
CDH3-201ENST00000264012 TMPRSS3P57727 454 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
CDH3-201ENST00000264012 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 SAXO1Q8IYX7 474 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 ZNF714Q96N38 554 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 COA4Q9NYJ1 87 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 SNX22Q96L94 193 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 NPBWR2P48146 333 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 NAAAQ02083 359 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 MMDQ15546 238 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 NSUN5P2Q63ZY6 315 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 SLC35E3Q7Z769 313 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 OR10D4PQ8NGN7 298 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
CDH3-201ENST00000264012 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 KRTDAPP60985 99 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 NUDT16L1Q9BRJ7 211 aaKnown RBP12.03□□□□□ -0.48
CDH3-201ENST00000264012 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 MS4A7Q9GZW8 240 aaPredicted RBP12.03□□□□□ -0.48
CDH3-201ENST00000264012 PITX3O75364 302 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 ARG1P05089 322 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 UMODP07911 640 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 GPR6P46095 362 aaPredicted RBP12.03□□□□□ -0.48
CDH3-201ENST00000264012 C19orf48Q6RUI8 117 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 RASL11BQ9BPW5 248 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 A0A0G2JMM0 328 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 A0A1W2PPB8 328 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 A0A1W2PRS3 328 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 KIR3DP1A8MWS1 328 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 APELAP0DMC3 54 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 ANKRD55Q3KP44 614 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 TEPPQ6URK8 271 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 TMEM171Q8WVE6 324 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 RANP62826 216 aaKnown RBP12.03□□□□□ -0.48
CDH3-201ENST00000264012 GAMTQ14353 236 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 MRGPRGQ86SM5 289 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 SDHCQ99643 169 aaPredicted RBP12.03□□□□□ -0.48
CDH3-201ENST00000264012 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
CDH3-201ENST00000264012 ANK1P16157 1881 aa12.02□□□□□ -0.48
CDH3-201ENST00000264012 ODAMA1E959 279 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms