RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 RLFQ13129 1914 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 J3QR06 171 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 OR4A8P0C604 315 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 FGF5P12034 268 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 G6PC2Q9NQR9 355 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 BET1LQ9NYM9 111 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 CLN8Q9UBY8 286 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 TMEM265A0A087WTH1 108 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 C1QL1O75973 258 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 CD74P04233 296 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 CELA2AP08217 269 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 NSUN5P2Q63ZY6 315 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 SLC2A8Q9NY64 477 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
CD44-201ENST00000263398 MGST3O14880 152 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 HPRT1P00492 218 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 SCTP09683 121 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 COL8A1P27658 744 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 CD1BP29016 333 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 NHLRC3Q5JS37 347 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 TMEM251Q8N6I4 163 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 GRAMD2BQ96HH9 432 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 CDX2Q99626 313 aaPredicted RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 NPVFQ9HCQ7 196 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 IGHV1-45A0A0A0MS14 117 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 IGSF23A1L1A6 192 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 TMEM14DPA8MWL7 114 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 PRDX2P32119 198 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 OR4X1Q8NH49 305 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 MARS2Q96GW9 593 aaKnown RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 ESPL1Q14674 2120 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 FAM157AC9JC47 383 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 M0R2Z0 102 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 GNG7O60262 68 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 MPDU1O75352 247 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 P01737 135 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 IGKV3-11P04433 115 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 HSPB1P04792 205 aaKnown RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 Q5BKY6 102 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 WIPI2Q9Y4P8 454 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 HS3ST3B1Q9Y662 390 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 SNURFLB1AK76 121 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 BMPR1BO00238 502 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 SRSF10O75494 262 aaKnown RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 GOSR1O95249 250 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 THY1P04216 161 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 CTSBP07858 339 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 EGR4Q05215 589 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 GSX1Q9H4S2 264 aaPredicted RBP9.31□□□□□ -0.92
CD44-201ENST00000263398 C1RLQ9NZP8 487 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 INSIG2Q9Y5U4 225 aa9.31□□□□□ -0.92
CD44-201ENST00000263398 PSME4Q14997 1843 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 M0R296 226 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 RAB29O14966 203 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 TCAPO15273 167 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 HKR1P10072 659 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 FAM3BP58499 235 aaPredicted RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 CXorf66Q5JRM2 361 aaPredicted RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 FAM214BQ7L5A3 538 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 PERPQ96FX8 193 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 RSG1Q9BU20 258 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 TLNRD1Q9H1K6 362 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 ZNF71Q9NQZ8 489 aaPredicted RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 CBY3A6NI87 242 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 ACP1P24666 158 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 BRS3P32247 399 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 UCP2P55851 309 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 C10orf113Q5VZT2 155 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 Q6ZN92 141 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 ASCL5Q7RTU5 278 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 RND1Q92730 232 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 IL19Q9UHD0 177 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 NPTNQ9Y639 398 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 SCN2AQ99250 2005 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 OTOFQ9HC10 1997 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 CLDN14O95500 239 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 CSN3P07498 182 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 RPL31P62899 125 aaKnown RBP9.3□□□□□ -0.92
CD44-201ENST00000263398 C5orf17Q8NAS9 161 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 CHRNA10Q9GZZ6 450 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 TREM2Q9NZC2 230 aa9.3□□□□□ -0.92
CD44-201ENST00000263398 HBZP02008 142 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
CD44-201ENST00000263398 IER3P46695 156 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 P2RY6Q15077 328 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 ZNF596Q8TC21 504 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms