RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RBM7Q9Y580 266 aaKnown RBP18.9■□□□□ 0.62
SMARCB1-201ENST00000263121 OMGP23515 440 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 TMEM30BQ3MIR4 351 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 MORN2Q502X0 79 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 FAM216AQ8WUB2 273 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 H1FXQ92522 213 aaKnown RBP18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 GNG12Q9UBI6 72 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 DCHS2Q6V1P9 2916 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 FAM208BQ5VWN6 2430 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 PGLYRP1O75594 196 aaPredicted RBP18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 RAP2BP61225 183 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 SP6Q3SY56 376 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 TMEM200BQ69YZ2 307 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 ASB13Q8WXK3 278 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 WDR89Q96FK6 387 aaPredicted RBP18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 GFOD1Q9NXC2 390 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 IDI2-AS1Q9NZ38 188 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 MIOXQ9UGB7 285 aa18.89■□□□□ 0.61
SMARCB1-201ENST00000263121 C3orf85A0A1B0GTC6 90 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 CCSO14618 274 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 WNT2P09544 360 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 SRSF4Q08170 494 aaKnown RBP18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 MSMO1Q15800 293 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 NOXA1Q86UR1 476 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 ZNF645Q8N7E2 425 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 GLYATL2Q8WU03 294 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 EDARADDQ8WWZ3 215 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 TP53RKQ96S44 253 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 GAL3ST2Q9H3Q3 398 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 RAB18Q9NP72 206 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 KCNS2Q9ULS6 477 aa18.88■□□□□ 0.61
SMARCB1-201ENST00000263121 CHD6Q8TD26 2715 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 TRBV23-1A0A0A0MS06 115 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 G3V3Q6 166 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 S100GP29377 79 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 DRAM1Q8N682 238 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 LRTM2Q8N967 370 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 OR52M1Q8NGK5 317 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 MSI2Q96DH6 328 aaKnown RBP18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 NEIL1Q96FI4 390 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 ZNF714Q96N38 554 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 GPHA2Q96T91 129 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 AGMATQ9BSE5 352 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 OR2D2Q9H210 308 aa18.87■□□□□ 0.61
SMARCB1-201ENST00000263121 GPR37O15354 613 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 PHF1O43189 567 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 TNFSF12O43508 249 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 GZMKP49863 264 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 NKX2-5P52952 324 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 LIAT1Q6ZQX7 453 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 ZBTB34Q8NCN2 500 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 OR10A7Q8NGE5 316 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 OR2T35Q8NGX2 323 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 CCL19Q99731 98 aa18.86■□□□□ 0.61
SMARCB1-201ENST00000263121 ITGB1BP1O14713 200 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 ADAP1O75689 374 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 MMP23AO75900 390 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 RGS11O94810 467 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 OR8B3Q8NGG8 313 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 C5orf30Q96GV9 206 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 OR8B2Q96RD0 313 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 TMEM222Q9H0R3 208 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 RNF150Q9ULK6 438 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 H0Y980 276 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 J3QKU1 62 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 ST8SIA5O15466 376 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 CCL3L1P16619 93 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 F2RP25116 425 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 GPR6P46095 362 aaPredicted RBP18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 UTF1Q5T230 341 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 PRAMEF5Q5TYX0 476 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 RPUSD1Q9UJJ7 312 aaKnown RBP18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 PSG11Q9UQ72 335 aa18.85■□□□□ 0.61
SMARCB1-201ENST00000263121 F5H0A9 414 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 IGHV4-39P01824 125 aa18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 DLX6P56179 175 aa18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 EIF4EBP1Q13541 118 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 Q5BKY6 102 aa18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 HEPN1Q6WQI6 88 aa18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 ZNF295-AS1Q8N0V1 137 aa18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 RANBP3Q9H6Z4 567 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 PATZ1Q9HBE1 687 aaKnown RBP18.84■□□□□ 0.61
SMARCB1-201ENST00000263121 B3GALNT1O75752 331 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 UCP1P25874 307 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 ZNF134P52741 427 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 SRPXP78539 464 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 WDR25Q64LD2 544 aaPredicted RBP18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 GSG1LQ6UXU4 331 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 LGI3Q8N145 548 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 ZNF439Q8NDP4 499 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 LHFPL5Q8TAF8 219 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 C18orf12Q96KH6 178 aa18.83■□□□□ 0.61
SMARCB1-201ENST00000263121 SPTAN1Q13813 2472 aaKnown RBP18.83■□□□□ 0.6
SMARCB1-201ENST00000263121 FAM25EA8MYX2 175 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 DNASE1P24855 282 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 ABHD14BQ96IU4 210 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 HYLS1Q96M11 299 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 TMEM56Q96MV1 263 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 IFI27L2Q9H2X8 130 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 TMEM56-RWDD3S4R434 201 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms