RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TRAPPC1Q9Y5R8 145 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 FREM2Q5SZK8 3169 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 hCG_38984A0A1B0GV85 526 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 LMO7DNF2Z398 122 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 VAMP5O95183 116 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 PSG2P11465 335 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 KIR2DS4P43632 304 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 KIR2DS1Q14954 304 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 FADS6Q8N9I5 356 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 SPACA9Q96E40 222 aaPredicted RBP12.77□□□□□ -0.36
XRCC1-201ENST00000262887 REPIN1Q9BWE0 567 aaKnown RBP12.77□□□□□ -0.36
XRCC1-201ENST00000262887 CACNG5Q9UF02 275 aa12.77□□□□□ -0.36
XRCC1-201ENST00000262887 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
XRCC1-201ENST00000262887 LILRA1O75019 489 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 NXPH2O95156 264 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 NAPSAO96009 420 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
XRCC1-201ENST00000262887 LEMD1Q68G75 181 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 C11orf42Q8N5U0 333 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 OR4C12Q96R67 309 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 MIEN1Q9BRT3 115 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 OR2J1Q9GZK6 312 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.37
XRCC1-201ENST00000262887 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 IGKV1D-33P01593 117 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 IGKV1-33P01594 117 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 ZNF32P17041 273 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 IL3RAP26951 378 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 RPL15P61313 204 aaKnown RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 MAJINQ3KP22 176 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 Q6ZRM9 215 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 TAF15Q92804 592 aaKnown RBP eCLIP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 RASL10BQ96S79 203 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 ZNF391Q9UJN7 358 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 CHTOPQ9Y3Y2 248 aaKnown RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 PIGBOS1A0A0B4J2F0 54 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 UBE2L5PA0A1B0GUS4 154 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 NUPR1O60356 82 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 BATFQ16520 125 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 PARD6GQ9BYG4 376 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
XRCC1-201ENST00000262887 MSL2Q9HCI7 577 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 PLA2G3Q9NZ20 509 aa12.76□□□□□ -0.37
XRCC1-201ENST00000262887 VENTXO95231 258 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
XRCC1-201ENST00000262887 CTXN2P0C2S0 81 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 CHRNA7P36544 502 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 TNFSF10P50591 281 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 Q6ZS52 159 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 LRP11Q86VZ4 500 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 OR5T1Q8NG75 326 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 ATP23Q9Y6H3 246 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 IGLV3-12A0A075B6K2 115 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 A0A0U1RQK1 487 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 CD300LBA8K4G0 201 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 TNFSF13O75888 250 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 B4GALT1P15291 398 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 BCL3P20749 454 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 GCH1P30793 250 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 SPANXN5Q5MJ07 72 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 COL5A1-AS1Q5SY13 56 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 NUFIP2Q7Z417 695 aaKnown RBP12.75□□□□□ -0.37
XRCC1-201ENST00000262887 ZIC4Q8N9L1 334 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 SLC25A22Q9H936 323 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 MANBALQ9NQG1 85 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 ASXL3Q9C0F0 2248 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 C20orf202A1L168 122 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A10PA6NDY2 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A18PA6NE21 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A16PA6NEW6 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 OR6C6A6NF89 314 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A20PA6NIJ5 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A8PA6NJQ4 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A7PA6NKC0 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A22PA8MWA6 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A12PA8MX19 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A5PA8MXJ8 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A23PA8MXZ1 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A15PP0C7V4 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A13PP0C7W8 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A14PP0C7W9 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FAM90A24PP0C7X0 464 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 RAB7AP51149 207 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 CLDN15P56746 228 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 WDYHV1Q96HA8 205 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 TECTBQ96PL2 329 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms