RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 APH1AQ96BI3 265 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 OR4C12Q96R67 309 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 SDF2L1Q9HCN8 221 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 TRBV6-6A0A0A6YYG2 114 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 UBE2L5PA0A1B0GUS4 154 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 A0A1W2PR80 420 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 SYNGR4O95473 234 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 PLP2Q04941 152 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 RHOVQ96L33 236 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 SNX22Q96L94 193 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 CABLES2Q9BTV7 478 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 ZNF703Q9H7S9 590 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-201ENST00000261693 TNRC18O15417 2968 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-201ENST00000261693 DUSP3P51452 185 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-201ENST00000261693 ZXDAP98168 799 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 LRRC75BQ2VPJ9 315 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 MBD3L1Q8WWY6 194 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 SMOC1Q9H4F8 434 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 C12orf49Q9H741 205 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
SCARB1-201ENST00000261693 MAP1LC3B2A6NCE7 125 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 NEURL1O76050 574 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 CD55P08174 381 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 HBG1P69891 147 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 HBG2P69892 147 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 NUFIP2Q7Z417 695 aaKnown RBP16.38■□□□□ 0.21
SCARB1-201ENST00000261693 LINC00596Q86U02 117 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 OR13D1Q8NGV5 346 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 MAP1LC3BQ9GZQ8 125 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 PLA2G3Q9NZ20 509 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 COX5BP10606 129 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 PNRC1Q12796 327 aaPredicted RBP16.38■□□□□ 0.21
SCARB1-201ENST00000261693 CLN3Q13286 438 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 SSPNQ14714 243 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 LSM10Q969L4 123 aaKnown RBP16.38■□□□□ 0.21
SCARB1-201ENST00000261693 PRDM13Q9H4Q3 707 aa16.38■□□□□ 0.21
SCARB1-201ENST00000261693 OR5H1A6NKK0 313 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 ARR3P36575 388 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 Q6P435 159 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 C6orf15Q6UXA7 325 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-201ENST00000261693 NECAP1Q8NC96 275 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 S100PBPQ96BU1 408 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 WDR61Q9GZS3 305 aaKnown RBP16.37■□□□□ 0.21
SCARB1-201ENST00000261693 OR51I2Q9H344 312 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 VAX2Q9UIW0 290 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 ZNF737O75373 536 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 APLNRP35414 380 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 CEACAM6P40199 344 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 RND2P52198 227 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 ADIRFQ15847 76 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 TMEM41BQ5BJD5 291 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 FAM173AQ9BQD7 235 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 PSMG3Q9BT73 122 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-201ENST00000261693 OPA3Q9H6K4 179 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 PRSS50Q9UI38 385 aa16.37■□□□□ 0.21
SCARB1-201ENST00000261693 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-201ENST00000261693 YKT6O15498 198 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 GATCO43716 136 aaKnown RBP16.36■□□□□ 0.21
SCARB1-201ENST00000261693 PDGFBP01127 241 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-201ENST00000261693 IGKV1D-33P01593 117 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 IGKV1-33P01594 117 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 DEFA6Q01524 100 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 GAMTQ14353 236 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 WDR25Q64LD2 544 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-201ENST00000261693 TMEM105Q8N8V8 129 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 TMEM9BQ9NQ34 198 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 MPC1Q9Y5U8 109 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 OR5B21A6NL26 309 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 PTBP3O95758 552 aaKnown RBP16.36■□□□□ 0.21
SCARB1-201ENST00000261693 OR2H2O95918 312 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 MRGPRGQ86SM5 289 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 LHX4Q969G2 390 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 TMEM242Q9NWH2 141 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 GFOD1Q9NXC2 390 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 RNF150Q9ULK6 438 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 LOXL2Q9Y4K0 774 aa16.36■□□□□ 0.21
SCARB1-201ENST00000261693 ELOA3CA0A087WX78 387 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 CLDN1O95832 211 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 MT-CO3P00414 261 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 RPS16P62249 146 aaKnown RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 SLC38A11Q08AI6 406 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 FGFRL1Q8N441 504 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 SMIM7Q9BQ49 75 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 HIST1H1BP16401 226 aaKnown RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 GPX4P36969 197 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 SERF2P84101 59 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 FAM53AQ6NSI3 398 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 LINC00696Q6ZRV3 163 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 RPP25LQ8N5L8 163 aaKnown RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 DRAM1Q8N682 238 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 TAF15Q92804 592 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■■□□ 15
SCARB1-201ENST00000261693 RPUSD4Q96CM3 377 aaKnown RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 TTTY12Q9BZ98 90 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 SLC39A9Q9NUM3 307 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 LIN7CQ9NUP9 197 aaKnown RBP16.35■□□□□ 0.21
SCARB1-201ENST00000261693 B4GALT7Q9UBV7 327 aa16.35■□□□□ 0.21
SCARB1-201ENST00000261693 SELEP16581 610 aa16.34■□□□□ 0.21
SCARB1-201ENST00000261693 TUBG1P23258 451 aa16.34■□□□□ 0.21
SCARB1-201ENST00000261693 CLEC12BQ2HXU8 276 aa16.34■□□□□ 0.21
SCARB1-201ENST00000261693 WDR86Q86TI4 376 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms