RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 IGKV1D-12P01611 117 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SERPINE2P07093 398 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ESDP10768 282 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 PRSS12P56730 875 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 C17orf67Q0P5P2 114 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 CNN3Q15417 329 aaKnown RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SNAI3Q3KNW1 292 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SPANXN5Q5MJ07 72 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR8G2PQ6IF36 304 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 UNQ5815/PRO19632Q6UWF5 114 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 HAPLN4Q86UW8 402 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 MCEMP1Q8IX19 187 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 C1orf174Q8IYL3 243 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR10V1Q8NGI7 309 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR2AE1Q8NHA4 323 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SPPL3Q8TCT6 385 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 MRGPRDQ8TDS7 321 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 APH1AQ96BI3 265 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 STARD4Q96DR4 205 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF799Q96GE5 643 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZPBPQ9BS86 351 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 RALGAPA1Q6GYQ0 2036 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 TDRD6O60522 2096 aaKnown RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 KIAA1324LA8MWY0 1029 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 HYPMO75409 117 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 TOMM40O96008 361 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 NRASP01111 189 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 KRASP01116 189 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 TNFP01375 233 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 IGHEP01854 428 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 WNT2P09544 360 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 MPLP40238 635 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 LHX2P50458 406 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 YPEL3P61236 119 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 NSDHLQ15738 373 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 C16orf47Q6ZP98 133 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 PSMF1Q92530 271 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 FAM131CQ96AQ9 280 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 CCDC74BQ96LY2 380 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF586Q9NXT0 402 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 FBXL7Q9UJT9 491 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV3D-11A0A0A0MRZ8 115 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 A0A1W2PNR3 127 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 C11orf94C9JXX5 98 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 EFNA2O43921 213 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 PGLYRP1O75594 196 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 SCTP09683 121 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 C1QTNF9P0C862 333 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 EGR1P18146 543 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 MSR1P21757 451 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 CBLN1P23435 193 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 NPPCP23582 126 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 S100GP29377 79 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 CTRLP40313 264 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 RNPS1Q15287 305 aaKnown RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 RSPO1Q2MKA7 263 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-201ENST00000261443 FBLN7Q53RD9 439 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 ACSM6Q6P461 480 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZSR6 202 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 LHFPL2Q6ZUX7 228 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 BATF2Q8N1L9 274 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 OR2D3Q8NGH3 330 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 OR10G9Q8NGN4 311 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 OR10G7Q8NGN6 311 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 OR51H1Q8NH63 302 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 CACNG5Q9UF02 275 aa6.17□□□□□ -1.42
CSDE1-201ENST00000261443 LOC400499M0QZD8 3231 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 CD300LBA8K4G0 201 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 TLX3O43711 291 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 CBR3O75828 277 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 IGLC2P0DOY2 106 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 DRD1P21728 446 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 F2RP25116 425 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 RBM11P57052 281 aaKnown RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 UBE2G2P60604 165 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 PMP22Q01453 160 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SLC38A11Q08AI6 406 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 C1orf61Q13536 156 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 ASCL4Q6XD76 172 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZRM9 215 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZSR3 168 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SFRP2Q96HF1 295 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF703Q9H7S9 590 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-201ENST00000261443 BET1LQ9NYM9 111 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 PLEK2Q9NYT0 353 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 MDFIC2A0A1B0GVS7 189 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 B4DGG1 531 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 PPBPP02775 128 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SERPINA7P05543 415 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 PSG2P11465 335 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SLC25A6P12236 298 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 KITLGP21583 273 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 HIST3H3Q16695 136 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 GCNT2Q8N0V5 402 aa6.16□□□□□ -1.42
CSDE1-201ENST00000261443 SPTSSAQ969W0 71 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms