RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CRYAAP02489 173 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 S100GP29377 79 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 RPL29P47914 159 aaKnown RBP13.53□□□□□ -0.24
LMNB1-201ENST00000261366 SRYQ05066 204 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 TMEM41BQ5BJD5 291 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 CLEC18CQ8NCF0 446 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 PSMF1Q92530 271 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 RAB24Q969Q5 203 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 OR51I2Q9H344 312 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 ATP23Q9Y6H3 246 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 USF3Q68DE3 2245 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 KIR2DS1A0A191URI9 304 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 PGPEP1LA6NFU8 196 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 C1QTNF9BB2RNN3 333 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 RFPL3SP0C7P2 107 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 HNF1AP20823 631 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 KIR2DS4P43632 304 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 UBE2G2P60604 165 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 FOXO1Q12778 655 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 KIR2DS1Q14954 304 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
LMNB1-201ENST00000261366 NEU1Q99519 415 aa13.53□□□□□ -0.24
LMNB1-201ENST00000261366 ZNF552Q9H707 407 aaPredicted RBP13.53□□□□□ -0.24
LMNB1-201ENST00000261366 NGFP01138 241 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 CXCL12P48061 93 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 ACSM6Q6P461 480 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 MBD3L1Q8WWY6 194 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.24
LMNB1-201ENST00000261366 CTDSP1Q9GZU7 261 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 RNF150Q9ULK6 438 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.24
LMNB1-201ENST00000261366 A6NNC1 897 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF705FA8MVS1 300 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF705DP0CH99 300 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF705BP0CI00 300 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 FGF5P12034 268 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 RAC1P63000 192 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 HBG1P69891 147 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 HBG2P69892 147 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 TNFRSF9Q07011 255 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 PCOLCEQ15113 449 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 LRRC75BQ2VPJ9 315 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 FAM78BQ5VT40 261 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 CYP2G1PQ6ZSU1 146 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 MRPL21Q7Z2W9 205 aaKnown RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 VASH2Q86V25 355 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 MKXQ8IYA7 352 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 TMEM256Q8N2U0 113 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 TAF15Q92804 592 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 ABHD14BQ96IU4 210 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
LMNB1-201ENST00000261366 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 ACTR3CQ9C0K3 210 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-201ENST00000261366 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 TGOLN2O43493 480 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 PAGE4O60829 102 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 LILRA1O75019 489 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 KBTBD11O94819 623 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF25P17030 456 aaPredicted RBP13.51□□□□□ -0.25
LMNB1-201ENST00000261366 PSMB3P49720 205 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 FGF12P61328 243 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 C21orf62-AS1Q17RA5 79 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
LMNB1-201ENST00000261366 BTNL3Q6UXE8 466 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 DNASE2BQ8WZ79 361 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 PCED1AQ9H1Q7 454 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 TCEAL6Q6IPX3 200 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 OR2T10Q8NGZ9 312 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 OR10D3Q8NH80 312 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 TMEM18Q96B42 140 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 TMEM204Q9BSN7 226 aa13.51□□□□□ -0.25
LMNB1-201ENST00000261366 DNAJC13O75165 2243 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 IGHV5-10-1A0A0J9YXX1 117 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 KRASP01116 189 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 GYPAP02724 150 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 SSR4P51571 173 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 BATFQ16520 125 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF705AQ6ZN79 300 aaPredicted RBP13.5□□□□□ -0.25
LMNB1-201ENST00000261366 P2RX4Q99571 388 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 GPR35Q9HC97 309 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 CLN8Q9UBY8 286 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 IL17BQ9UHF5 180 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 NUPR1O60356 82 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 FKBP2P26885 142 aaKnown RBP13.5□□□□□ -0.25
LMNB1-201ENST00000261366 RAC3P60763 192 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 CPT1CQ8TCG5 803 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
LMNB1-201ENST00000261366 IL22RA2Q969J5 263 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 DUXBA0A1W2PPF3 345 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 K7ESF4 209 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 RBMXL2O75526 392 aaKnown RBP13.5□□□□□ -0.25
LMNB1-201ENST00000261366 HRASP01112 189 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 CLDN15P56746 228 aa13.5□□□□□ -0.25
LMNB1-201ENST00000261366 ZNF324BQ6AW86 544 aaPredicted RBP13.5□□□□□ -0.25
LMNB1-201ENST00000261366 ABLIM2Q6H8Q1 611 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms