RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GALNT14Q96FL9 552 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 MRGPRX3Q96LB0 322 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 WNT10AQ9GZT5 417 aa11.51□□□□□ -0.57
PCDHGA3-201ENST00000253812 DEFB108AA8MXU0 73 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 SHISA7A6NL88 538 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 MS4A18H0YCH9 400 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 MS4A18Q3C1V0 323 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 LINC00696Q6ZRV3 163 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 ANKRD37Q7Z713 158 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR8G5Q8NG78 346 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 NPVFQ9HCQ7 196 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 QSER1Q2KHR3 1735 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 DOCK5Q9H7D0 1870 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 LRRC37AA6NMS7 1700 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZDBF2Q9HCK1 2354 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 DCAF12Q5T6F0 453 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 FER1L6-AS2Q96M78 137 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 TBL2Q9Y4P3 447 aaKnown RBP11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 ATG2BQ96BY7 2078 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 IGHV3-15A0A0B4J1V0 119 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 CKS2P33552 79 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 COL10A1Q03692 680 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 RBPJQ06330 500 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF793Q6ZN11 406 aa11.5□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 CEACAM5P06731 702 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 MEF2CQ06413 473 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 PQLC2Q6ZP29 291 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 RBFOX2O43251 390 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 Q6ZS52 159 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR4D11Q8NGI4 311 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 SDHCQ99643 169 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 NCOR1P1Q9H4R4 102 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 CNOT1A5YKK6 2376 aaKnown RBP11.49□□□□□ -0.57
PCDHGA3-201ENST00000253812 MEX3AA1L020 520 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 CA11O75493 328 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PRSS2P07478 247 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 BEND2Q8NDZ0 799 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 SEC16AO15027 2179 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 RPS11P62280 158 aaKnown RBP eCLIP11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR13G1Q8NGZ3 307 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 C2orf88Q9BSF0 95 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PLA2G2FQ9BZM2 168 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 RBKSQ9H477 322 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PXMP4Q9Y6I8 212 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PLPP3O14495 311 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 MPZL1O95297 269 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PNLIPP16233 465 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 CBLN1P23435 193 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 GZMMP51124 257 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 SLC25A38Q96DW6 304 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 PAXXQ9BUH6 204 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 SERGEFQ9UGK8 458 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 IGLV3-16A0A075B6K0 115 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR11H12B2RN74 326 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 HES3Q5TGS1 186 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR11H1Q8NG94 326 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 OR11H2Q8NH07 326 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 WDYHV1Q96HA8 205 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 KCNS1Q96KK3 526 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 MPC1Q9Y5U8 109 aa11.48□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF205O95201 554 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF32P17041 273 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 MGAT2Q10469 447 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CYP2G1PQ6ZSU1 146 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 C10orf111Q8N326 155 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 GRAMD2BQ96HH9 432 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 ALG1L2C9J202 215 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 H3BUT2 72 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 SPATA46Q5T0L3 261 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 ZNF774Q6NX45 483 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 MRGPRDQ8TDS7 321 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 NRXN2Q9P2S2 1712 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 A0A1W2PPC1 479 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 EML2O95834 649 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 PSG2P11465 335 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 C2orf68Q2NKX9 166 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 TMEM222Q9H0R3 208 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 PPIL1Q9Y3C6 166 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 TNFSF11O14788 317 aa11.47□□□□□ -0.57
PCDHGA3-201ENST00000253812 CISD3P0C7P0 127 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms