RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CCL1P22362 96 aa13.65□□□□□ -0.23
SLC6A8-201ENST00000253122 H2BFWTQ7Z2G1 175 aa13.65□□□□□ -0.23
SLC6A8-201ENST00000253122 TIPARPQ7Z3E1 657 aaKnown RBP13.65□□□□□ -0.23
SLC6A8-201ENST00000253122 CACNA1BQ00975 2339 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 CD33P20138 364 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 RAB4AP20338 218 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 WNT5AP41221 380 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 OR3A1P47881 315 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 OR8B8Q15620 311 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 NUFIP2Q7Z417 695 aaKnown RBP13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 C2orf88Q9BSF0 95 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 ANAPC10Q9UM13 185 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 DOCK10Q96BY6 2186 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 LOC102724200A0A096LPH7 203 aaPredicted RBP13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 IGKV1-12A0A0C4DH73 117 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 IGKV1D-12P01611 117 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 SERF2P84101 59 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 RABEPKQ7Z6M1 372 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 ACY3Q96HD9 319 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 PCED1AQ9H1Q7 454 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 PLEKHA3Q9HB20 300 aa13.64□□□□□ -0.23
SLC6A8-201ENST00000253122 A0A0J9YW62 118 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 KIAA1324LA8MWY0 1029 aaPredicted RBP13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CEACAM6P40199 344 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 PSG4Q00888 419 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CATR1Q13166 79 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 SSX7Q7RTT5 188 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 TAF15Q92804 592 aaKnown RBP eCLIP13.63□□□□□ -0.239e-6■□□□□ 8.1
SLC6A8-201ENST00000253122 ANAPC16Q96DE5 110 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 PNRC2Q9NPJ4 139 aaKnown RBP13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 OR2W1Q9Y3N9 320 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 A0A1B0GW64 132 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 A6NNC1 897 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 RNF212BA8MTL3 300 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 A8MWP6 167 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 PIAS2O75928 621 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 GRPP07492 148 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CCL3P10147 92 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CRISP2P16562 243 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 HOXA6P31267 233 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 TMEM183BQ1AE95 376 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 RHBDD2Q6NTF9 364 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 UBALD2Q8IYN6 164 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 FCN1O00602 326 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 AQP7O14520 342 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 KBTBD11O94819 623 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CDC34P49427 236 aaPredicted RBP13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 PLGLB1Q02325 96 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CADM4Q8NFZ8 388 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 HSPB9Q9BQS6 159 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 IL36RNQ9UBH0 155 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 CLN8Q9UBY8 286 aa13.63□□□□□ -0.23
SLC6A8-201ENST00000253122 IGKV1-27A0A075B6S5 117 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 BCAT2O15382 392 aaPredicted RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 THBS3P49746 956 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 NUBP1P53384 320 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 WIPI1Q5MNZ9 446 aaPredicted RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 UHRF2Q96PU4 802 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 P2RX4Q99571 388 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 TRBV24-1A0A075B6N3 115 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 NDUFB4O95168 129 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 TMEM50AO95807 157 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 MPLP40238 635 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 ENY2Q9NPA8 101 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 TMEM9BQ9NQ34 198 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 ID3Q02535 119 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 BTNL3Q6UXE8 466 aa13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 ZNF501Q96CX3 271 aaPredicted RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 RBM14Q96PK6 669 aaKnown RBP13.62□□□□□ -0.23
SLC6A8-201ENST00000253122 H0Y980 276 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 RIMS4Q9H426 269 aaPredicted RBP13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 CTXND1A0A1B0GTU2 59 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 UCP1P25874 307 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 TRIM61Q5EBN2 209 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 CYP2G1PQ6ZSU1 146 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 OR5D13Q8NGL4 314 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 DTD1Q8TEA8 209 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 OR2H1Q9GZK4 316 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 TMEM38BQ9NVV0 291 aa13.61□□□□□ -0.23
SLC6A8-201ENST00000253122 MGST1P10620 155 aaKnown RBP13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 GABRA2P47869 451 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 DEFA4P12838 97 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 G6PCP35575 357 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 FAM58AQ8N1B3 248 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 BORCS7Q96B45 105 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
SLC6A8-201ENST00000253122 PKDREJQ9NTG1 2253 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms