RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MAP1LC3CQ9BXW4 147 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 GLI3P10071 1580 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 IL24Q13007 206 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 OR8B3Q8NGG8 313 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PLPPR5Q32ZL2 321 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 OCIAD1Q9NX40 245 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 C2CD3Q4AC94 2353 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 HELTA6NFD8 242 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PARP11Q9NR21 331 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 TNFSF15O95150 251 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 ZNF826PQ6ZT77 177 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 OR4X1Q8NH49 305 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 APOBEC3DQ96AK3 386 aaPredicted RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 ZNF385AQ96PM9 386 aaKnown RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 PDCD11Q14690 1871 aaKnown RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 IGKV3D-11A0A0A0MRZ8 115 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 IGKV3-11P04433 115 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PGA3P0DJD8 388 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 TWIST1Q15672 202 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 SLC36A1Q7Z2H8 476 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 C5orf17Q8NAS9 161 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 LRRK1Q38SD2 2015 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 SMIM21Q3B7S5 101 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 ATG4DQ86TL0 474 aaPredicted RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 MRPL37Q9BZE1 423 aaKnown RBP6.55□□□□□ -1.36
RIF1-201ENST00000243326 SYNGR1O43759 233 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 MFAP2P55001 183 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PP6455Q8WZ26 134 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 PITPNC1Q9UKF7 332 aa6.55□□□□□ -1.36
RIF1-201ENST00000243326 WISP3O95389 354 aaPredicted RBP6.54□□□□□ -1.36
RIF1-201ENST00000243326 C21orf58P58505 322 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 PAFAH1B2P68402 229 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 WDR73Q6P4I2 378 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 FAM19A2Q8N3H0 131 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 ZNF418Q8TF45 676 aaPredicted RBP6.54□□□□□ -1.36
RIF1-201ENST00000243326 SHISA7A6NL88 538 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 PQLC2Q6ZP29 291 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 RABEPKQ7Z6M1 372 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 MOGAT3Q86VF5 341 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 PDPNQ86YL7 162 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 SELENOHQ8IZQ5 122 aaKnown RBP6.54□□□□□ -1.36
RIF1-201ENST00000243326 SPINT1O43278 529 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 CISD3P0C7P0 127 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 P2RY4P51582 365 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 FBXO46Q6PJ61 603 aaPredicted RBP6.54□□□□□ -1.36
RIF1-201ENST00000243326 OR4A4PQ8NGN8 299 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 ELSPBP1Q96BH3 223 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 CACFD1Q9UGQ2 172 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 MOSPD3O75425 235 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 SRIP30626 198 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 RAB40CQ96S21 281 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 S4R3C0 116 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 DHRS7CA6NNS2 312 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 OR2A4O95047 310 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 SSTR5P35346 364 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 GNG3P63215 75 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 PSG6Q00889 435 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 NHLRC3Q5JS37 347 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 SLC35E3Q7Z769 313 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 OR2A7Q96R45 310 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 STRCQ7RTU9 1775 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 FAM90A27PA6NNH2 459 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 WDR81Q562E7 1941 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 TM4SF4P48230 202 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 SGMS2Q8NHU3 365 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 KCNE4Q8WWG9 221 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 RAG2P55895 527 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 MANBALQ9NQG1 85 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 P01737 135 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 TRGV8A0A0C4DH27 118 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 B4E171 279 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 CCL3P10147 92 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 MAGEA5P43359 124 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 WDFY1Q8IWB7 410 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 OR1L1Q8NH94 360 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 GATAD1Q8WUU5 269 aa6.54□□□□□ -1.36
RIF1-201ENST00000243326 WDR61Q9GZS3 305 aaKnown RBP6.54□□□□□ -1.36
RIF1-201ENST00000243326 HAND1O96004 215 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 PRRX1P54821 245 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 COL10A1Q03692 680 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 ZNF502Q8TBZ5 544 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 M1APQ8TC57 530 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 LINC00615Q96LM1 132 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 DEDDO75618 318 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 FCGR3AP08637 254 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 FDX2Q6P4F2 183 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 PTPMT1Q8WUK0 201 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 SCARF2Q96GP6 870 aaPredicted RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 ASCL3Q9NQ33 180 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 J3QR89 54 aa6.53□□□□□ -1.36
RIF1-201ENST00000243326 RBM11P57052 281 aaKnown RBP6.53□□□□□ -1.36
RIF1-201ENST00000243326 SNAI3Q3KNW1 292 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms