RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 CRISPLD2Q9H0B8 497 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 WASHC3Q9Y3C0 194 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 HS3ST1O14792 307 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 MPPED1O15442 326 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 ZIC3O60481 467 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 IGHV4-34P06331 123 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 TAS2R30P59541 319 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 ACOT6Q3I5F7 207 aaPredicted RBP12.91□□□□□ -0.34
HOXC12-201ENST00000243103 CLCF1Q9UBD9 225 aa12.91□□□□□ -0.34
HOXC12-201ENST00000243103 NDUFB8O95169 186 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 SCTP09683 121 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 KITLGP21583 273 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 TPTE2P1Q5T6R2 138 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 PLCXD3Q63HM9 321 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 RDH5Q92781 318 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 PTX4Q96A99 478 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 ELSPBP1Q96BH3 223 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 NUDT11Q96G61 164 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 FREM1Q5H8C1 2179 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 KIAA1549LQ6ZVL6 1849 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 NAPSAO96009 420 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 MDH2P40926 338 aaKnown RBP12.9□□□□□ -0.34
HOXC12-201ENST00000243103 GPR3P46089 330 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 ARL16Q0P5N6 197 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 ZNF841Q6ZN19 808 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.9□□□□□ -0.34
HOXC12-201ENST00000243103 KMT5CQ86Y97 462 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 MSI2Q96DH6 328 aaKnown RBP12.9□□□□□ -0.34
HOXC12-201ENST00000243103 BORCS8Q96FH0 119 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 C1orf147Q96MC9 270 aaPredicted RBP12.9□□□□□ -0.34
HOXC12-201ENST00000243103 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 PSENENQ9NZ42 101 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 COPS7AQ9UBW8 275 aa12.9□□□□□ -0.34
HOXC12-201ENST00000243103 DMXL1Q9Y485 3027 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 A0A0G2JRQ6 117 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 SNURFLB1AK76 121 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 GFRA1P56159 465 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 EDDM3BP56851 147 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 PNRC1Q12796 327 aaPredicted RBP12.9□□□□□ -0.35
HOXC12-201ENST00000243103 ZNF738Q8NE65 137 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 RASL10BQ96S79 203 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 PMCHL2Q9BQD1 86 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.35
HOXC12-201ENST00000243103 ARFGEF3Q5TH69 2177 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 TRAV38-1A0A0B4J264 116 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 CXorf51AA0A1B0GTR3 108 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 PPYP01298 95 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
HOXC12-201ENST00000243103 HTD2P86397 168 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 FXYD3Q14802 87 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 EXT1Q16394 746 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 ZNF114Q8NC26 417 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 LHFPL6Q9Y693 200 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 C2CD4DB7Z1M9 353 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 GALNSP34059 522 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 ATP5G3P48201 142 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 RPL19P84098 196 aaKnown RBP12.89□□□□□ -0.35
HOXC12-201ENST00000243103 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 SMIM15Q7Z3B0 74 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 OR4C12Q96R67 309 aa12.89□□□□□ -0.35
HOXC12-201ENST00000243103 TBL2Q9Y4P3 447 aaKnown RBP12.89□□□□□ -0.35
HOXC12-201ENST00000243103 SMPD2O60906 423 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
HOXC12-201ENST00000243103 FOXF1Q12946 379 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 CCDC71LQ8N9Z2 235 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
HOXC12-201ENST00000243103 WFDC12Q8WWY7 111 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 IL36RNQ9UBH0 155 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 FBXL7Q9UJT9 491 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 MDFIC2A0A1B0GVS7 189 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 PITX3O75364 302 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 GLB1P16278 677 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 GCM1Q9NP62 436 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 C11orf94C9JXX5 98 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 SAP30O75446 220 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 TUSC2O75896 110 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 FBLP22087 321 aaKnown RBP12.88□□□□□ -0.35
HOXC12-201ENST00000243103 MAS1LP35410 378 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 EIF3IQ13347 325 aaKnown RBP12.88□□□□□ -0.35
HOXC12-201ENST00000243103 LYPD6Q86Y78 171 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
HOXC12-201ENST00000243103 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
HOXC12-201ENST00000243103 TNFSF13O75888 250 aa12.87□□□□□ -0.35
HOXC12-201ENST00000243103 PSG2P11465 335 aa12.87□□□□□ -0.35
HOXC12-201ENST00000243103 CFPP27918 469 aa12.87□□□□□ -0.35
HOXC12-201ENST00000243103 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
HOXC12-201ENST00000243103 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
HOXC12-201ENST00000243103 ACY3Q96HD9 319 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms