RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 RCC2Q9P258 522 aaKnown RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 HSF4Q9ULV5 492 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 A0A0A6YYD4 124 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 SLC33A1O00400 549 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 CTDSP2O14595 271 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 AMY1AP04745 511 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 AMY2AP04746 511 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 SNRNP70P08621 437 aaKnown RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 CHATP28329 748 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 RPL23AP62750 156 aaKnown RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 PRAMEF5Q5TYX0 476 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 C16orf82Q7Z2V1 217 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 SUMF2Q8NBJ7 301 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 OR4P4Q8NGL7 312 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 RAB3CQ96E17 227 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 MCRIP2Q9BUT9 160 aaKnown RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 DPCDQ9BVM2 203 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 RABL2AQ9UBK7 228 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-201ENST00000242776 RABL2BQ9UNT1 228 aa10.93□□□□□ -0.66
DDX39A-201ENST00000242776 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 TMEM82A0PJX8 343 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 FUOMA2VDF0 154 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 RAB27BO00194 218 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 SOCS1O15524 211 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 XRCC3O43542 346 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 RBP4P02753 201 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 HIST1H1DP16402 221 aaKnown RBP10.92□□□□□ -0.66
DDX39A-201ENST00000242776 ELK1P19419 428 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 CDK2P24941 298 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 BRS3P32247 399 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 MRPS15P82914 257 aaKnown RBP10.92□□□□□ -0.66
DDX39A-201ENST00000242776 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 OR8H2Q8N162 312 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 DIRAS2Q96HU8 199 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 RBM14Q96PK6 669 aaKnown RBP10.92□□□□□ -0.66
DDX39A-201ENST00000242776 MIXL1Q9H2W2 232 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 EXTL2Q9UBQ6 330 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
DDX39A-201ENST00000242776 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
DDX39A-201ENST00000242776 TRAV24A0A0B4J272 114 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 hADV38S2A0JD32 116 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-201ENST00000242776 SERPINE3A8MV23 424 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 HSPB6O14558 160 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 MGST3O14880 152 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 ZNF737O75373 536 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 OR2F2O95006 317 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 CSN2P05814 226 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 GSTP1P09211 210 aaKnown RBP10.91□□□□□ -0.66
DDX39A-201ENST00000242776 MNDAP41218 407 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 ECI1P42126 302 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 GRK1Q15835 563 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 MOGAT2Q3SYC2 334 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 SIGIRRQ6IA17 410 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 CNIH2Q6PI25 160 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 ABHD12Q8N2K0 398 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 OR6Q1Q8NGQ2 317 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 MUC7Q8TAX7 377 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 ARHGAP5-AS1Q96IT6 56 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 PECRQ9BY49 303 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 DPM3Q9P2X0 92 aa10.91□□□□□ -0.66
DDX39A-201ENST00000242776 LSM4Q9Y4Z0 139 aaKnown RBP10.91□□□□□ -0.66
DDX39A-201ENST00000242776 TRAV18A0A075B6X5 111 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 PSPNO60542 156 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 CA11O75493 328 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 TPPPO94811 219 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 OR3A1P47881 315 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 TMEM50BP56557 158 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 TAS2R20P59543 309 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 ATXN7L3Q14CW9 347 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-201ENST00000242776 PNLIPRP3Q17RR3 467 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 SPANXN2Q5MJ10 180 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 ING3Q9NXR8 418 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 ETAA1Q9NY74 926 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 ZNF581Q9P0T4 197 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
DDX39A-201ENST00000242776 MFNGO00587 321 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 CD3GP09693 182 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 GNB3P16520 340 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 TNFSF8P32971 234 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 MYCNOSP40205 109 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 GNG2P59768 71 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 PITPNAQ00169 270 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 MEF2CQ06413 473 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-201ENST00000242776 IL18Q14116 193 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 CDNFQ49AH0 187 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 PLAC9Q5JTB6 97 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 LINC00312Q9Y6C7 94 aa10.89□□□□□ -0.67
DDX39A-201ENST00000242776 TMEM30CPA0ZSE6 113 aa10.88□□□□□ -0.67
DDX39A-201ENST00000242776 UBE2QL1A1L167 161 aa10.88□□□□□ -0.67
DDX39A-201ENST00000242776 FABP12A6NFH5 140 aa10.88□□□□□ -0.67
DDX39A-201ENST00000242776 LY86O95711 162 aa10.88□□□□□ -0.67
DDX39A-201ENST00000242776 ERP29P30040 261 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms