RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TNFRSF1AP19438 455 aa19.43■□□□□ 0.7
MSX2-201ENST00000239243 KIAA2026Q5HYC2 2103 aa19.43■□□□□ 0.7
MSX2-201ENST00000239243 C11orf1Q9H5F2 150 aa19.43■□□□□ 0.7
MSX2-201ENST00000239243 BORCS7-ASMTA0A0B4J1R7 106 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 C15orf65H3BRN8 121 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 CD55P08174 381 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 ZNF16P17020 682 aaPredicted RBP19.42■□□□□ 0.7
MSX2-201ENST00000239243 ASCL1P50553 236 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 VAMP2P63027 116 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 CATR1Q13166 79 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 OR2C3Q8N628 320 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 EDARADDQ8WWZ3 215 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 RAB9BQ9NP90 201 aa19.42■□□□□ 0.7
MSX2-201ENST00000239243 A8MXK9 166 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 WRBO00258 174 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 CA7P43166 264 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 POLR2GP62487 172 aaKnown RBP eCLIP19.41■□□□□ 0.7
MSX2-201ENST00000239243 SLC25A31Q9H0C2 315 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 ESRP2Q9H6T0 727 aaKnown RBP19.41■□□□□ 0.7
MSX2-201ENST00000239243 OR6C3Q9NZP0 311 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 KRBOX1C9JBD0 128 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 CD80P33681 288 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 PPP1CCP36873 323 aaKnown RBP19.41■□□□□ 0.7
MSX2-201ENST00000239243 AKR1C2P52895 323 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 CXorf66Q5JRM2 361 aaPredicted RBP19.41■□□□□ 0.7
MSX2-201ENST00000239243 TCTEX1D1Q8N7M0 179 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 ST6GALNAC3Q8NDV1 305 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 GPR146Q96CH1 333 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 WFIKKN1Q96NZ8 548 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 JPT1Q9UK76 154 aa19.41■□□□□ 0.7
MSX2-201ENST00000239243 C17orf100A8MU93 164 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 SHOXO15266 292 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 SSSCA1O60232 199 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 ZP3P21754 424 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 SDSLQ96GA7 329 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 SMIM3Q9BZL3 60 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 PITX3O75364 302 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 ZNRF1Q8ND25 227 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 FAM212BQ9NTI7 297 aaPredicted RBP19.4■□□□□ 0.7
MSX2-201ENST00000239243 LYRM2Q9NU23 88 aaPredicted RBP19.4■□□□□ 0.7
MSX2-201ENST00000239243 TAS2R3Q9NYW6 316 aa19.4■□□□□ 0.7
MSX2-201ENST00000239243 MUC1P15941 1255 aaPredicted RBP19.39■□□□□ 0.69
MSX2-201ENST00000239243 CAV2P51636 162 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 ZNF585BQ52M93 769 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 STUMQ69YW2 141 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 C14orf79Q96F83 325 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 RNF150Q9ULK6 438 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 LRRC30A6NM36 301 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 IGKV1-39P01597 117 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 IGKV1D-39P04432 117 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 EWSR1Q01844 656 aaKnown RBP eCLIP19.39■□□□□ 0.69
MSX2-201ENST00000239243 ADAM5Q6NVV9 412 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 RFESDQ8TAC1 157 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 SAT2Q96F10 170 aaPredicted RBP19.39■□□□□ 0.69
MSX2-201ENST00000239243 FAM234AQ9H0X4 552 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 LPAR3Q9UBY5 353 aa19.39■□□□□ 0.69
MSX2-201ENST00000239243 A0A0G2JRQ6 117 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 NUDT19A8MXV4 375 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 ATG12O94817 140 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 FAM157CP0CG43 387 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 EPHA1P21709 976 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 EDDM3BP56851 147 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 FAM209AQ5JX71 171 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 ZNF66Q6ZN08 573 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 ARV1Q9H2C2 271 aa19.38■□□□□ 0.69
MSX2-201ENST00000239243 CYB5R3P00387 301 aaPredicted RBP19.37■□□□□ 0.69
MSX2-201ENST00000239243 EIF4EBP1Q13541 118 aaPredicted RBP19.37■□□□□ 0.69
MSX2-201ENST00000239243 DCTN5Q9BTE1 182 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 EGLN1Q9GZT9 426 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 MAGT1Q9H0U3 335 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 ZNF665Q9H7R5 613 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 PLCE1Q9P212 2302 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 TLN1Q9Y490 2541 aaKnown RBP19.37■□□□□ 0.69
MSX2-201ENST00000239243 NCMAPQ5T1S8 102 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 TEX36Q5VZQ5 186 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 GNG12Q9UBI6 72 aa19.37■□□□□ 0.69
MSX2-201ENST00000239243 IGHV3-43A0A0B4J1X8 118 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 ZNF705EA8MWA4 302 aaPredicted RBP19.36■□□□□ 0.69
MSX2-201ENST00000239243 TEX46H3BTG2 121 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 F2RL2O00254 374 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 YPEL1O60688 119 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 IGHV3-43DP0DP04 118 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 NHLH2Q02577 135 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 BAXQ07812 192 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 FBXL19-AS1Q494R0 122 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 ZNF808Q8N4W9 903 aaPredicted RBP19.36■□□□□ 0.69
MSX2-201ENST00000239243 MARC2Q969Z3 335 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 YPEL2Q96QA6 119 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 RAB40CQ96S21 281 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 HSD17B10Q99714 261 aaKnown RBP19.36■□□□□ 0.69
MSX2-201ENST00000239243 RAB19A4D1S5 217 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 IGKV1-5P01602 117 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 CHRNB4P30926 498 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 SULT1A2P50226 295 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 TLE1Q04724 770 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 ZNF266Q14584 549 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 FAM201AQ5SY85 155 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 OR1S2Q8NGQ3 325 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 CACNG5Q9UF02 275 aa19.36■□□□□ 0.69
MSX2-201ENST00000239243 RNF115Q9Y4L5 304 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms