RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 KAAG1Q9UBP8 84 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 JPT1Q9UK76 154 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 PAIP2BQ9ULR5 123 aaKnown RBP10.99□□□□□ -0.65
SLIRP-201ENST00000238688 TMED3Q9Y3Q3 217 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 HIVEP2P31629 2446 aa10.99□□□□□ -0.65
SLIRP-201ENST00000238688 ANK3Q12955 4377 aaKnown RBP10.99□□□□□ -0.65
SLIRP-201ENST00000238688 H0Y980 276 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM178BH3BS89 294 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 OVOL3O00110 214 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 GPR37O15354 613 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 LY6G6DO95868 133 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 SOD3P08294 240 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 RPA2P15927 270 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 GNRHRP30968 328 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 FXYD4P59646 89 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 BAMBIQ13145 260 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 ZNF345Q14585 488 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 MST1LQ2TV78 715 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 Q3ZCU0 254 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 OR52M1Q8NGK5 317 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 GRPEL2Q8TAA5 225 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 CORO2AQ92828 525 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 ABHD14BQ96IU4 210 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM56Q96MV1 263 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 RAB1BQ9H0U4 201 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 CBLN4Q9NTU7 201 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
SLIRP-201ENST00000238688 PPIAL4EA0A075B759 164 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 PPIAL4DF5H284 164 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 F2RL2O00254 374 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 CDS2O95674 445 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 HBZP02008 142 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 PPIAL4FP0DN26 164 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 CCL8P80075 99 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 AESQ08117 197 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 TMEM187Q14656 261 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 HFEQ30201 348 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 C9orf62Q8N4C0 152 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 SECTM1Q8WVN6 248 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 NEU4Q8WWR8 484 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-201ENST00000238688 RAB39BQ96DA2 213 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 C2orf50Q96LR7 162 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 LIN7CQ9NUP9 197 aaKnown RBP10.97□□□□□ -0.65
SLIRP-201ENST00000238688 RDH8Q9NYR8 311 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 TAS2R3Q9NYW6 316 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 LAMP3Q9UQV4 416 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 UBE2J1Q9Y385 318 aaPredicted RBP10.97□□□□□ -0.65
SLIRP-201ENST00000238688 PPIAL4AQ9Y536 164 aa10.97□□□□□ -0.65
SLIRP-201ENST00000238688 TRGV10A0A0A0MS01 117 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 A0A0D9SG52 128 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 IGHV1-69-2A0A0G2JMI3 117 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 C3orf85A0A1B0GTC6 90 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 hADV38S2A0JD32 116 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-201ENST00000238688 G3V3Q6 166 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 ATG12O94817 140 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 SLC25A6P12236 298 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 F2RP25116 425 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 UCP1P25874 307 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 RAB7AP51149 207 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 SLC9A3R2Q15599 337 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 ANKRD55Q3KP44 614 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 CLEC9AQ6UXN8 241 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 THAP6Q8TBB0 222 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 IL1F10Q8WWZ1 152 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 METTL8Q9H825 291 aaKnown RBP10.96□□□□□ -0.65
SLIRP-201ENST00000238688 GAB2Q9UQC2 676 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 HSPB11Q9Y547 144 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 LINC00312Q9Y6C7 94 aa10.96□□□□□ -0.65
SLIRP-201ENST00000238688 IGHV3-64DA0A0J9YX35 117 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 C5orf51A6NDU8 294 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 YPEL1O60688 119 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 OR2F2O95006 317 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 PI3P19957 117 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 PSMB6P28072 239 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 CEBPDP49716 269 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-201ENST00000238688 KRTAP1-1Q07627 177 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 CATR1Q13166 79 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 OR2F1Q13607 317 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 NDUFA5Q16718 116 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 DCAF12L2Q5VW00 463 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF767PQ75MW2 155 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF645Q8N7E2 425 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-201ENST00000238688 ARL11Q969Q4 196 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 MSI2Q96DH6 328 aaKnown RBP10.95□□□□□ -0.66
SLIRP-201ENST00000238688 CYYR1Q96J86 154 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 GAFA1Q96PS6 74 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 CHIAQ9BZP6 476 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 GAL3ST2Q9H3Q3 398 aa10.95□□□□□ -0.66
SLIRP-201ENST00000238688 MAB21L2Q9Y586 359 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms