RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 Q6ZS92 163 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 STX12Q86Y82 276 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 CBLN2Q8IUK8 224 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 COQ2Q96H96 371 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 PBDC1Q9BVG4 233 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 SYNGR2O43760 224 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 EPHA1P21709 976 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 OR3A1P47881 315 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 FABP6P51161 128 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 PRAMEF6Q5VXH4 476 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 OR1L1Q8NH94 360 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 FAM213BQ8TBF2 198 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 KCNS2Q9ULS6 477 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 CEP250Q9BV73 2442 aa13.58□□□□□ -0.24
UBE3D-201ENST00000237186 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 H7C2Y5 167 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 HBZP02008 142 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 PPT1P50897 306 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 FLI1Q01543 452 aaPredicted RBP13.57□□□□□ -0.24
UBE3D-201ENST00000237186 AESQ08117 197 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 SMIM21Q3B7S5 101 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 C3orf36Q3SXR2 165 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 DPPA3Q6W0C5 159 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 TMEM217Q8N7C4 229 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
UBE3D-201ENST00000237186 UBALD1Q8TB05 177 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 LURAP1Q96LR2 239 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 A6NLC8 198 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 PAX6P26367 422 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 CFHR2P36980 270 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 SPSB3Q6PJ21 355 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 FGFRL1Q8N441 504 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 TCTEX1D1Q8N7M0 179 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 AIFM2Q9BRQ8 373 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
UBE3D-201ENST00000237186 MSL2Q9HCI7 577 aa13.57□□□□□ -0.24
UBE3D-201ENST00000237186 NXPH3O95157 252 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 NFYBP25208 207 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 IL2RGP31785 369 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
UBE3D-201ENST00000237186 IZUMO4Q1ZYL8 232 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 OR10Z1Q8NGY1 313 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 SLC35B3Q9H1N7 401 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 MMP24Q9Y5R2 645 aa13.56□□□□□ -0.24
UBE3D-201ENST00000237186 CUL9Q8IWT3 2517 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 ASPMQ8IZT6 3477 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 COL10A1Q03692 680 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 FAM90A1Q86YD7 464 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 ABHD14AQ9BUJ0 271 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 UFSP2Q9NUQ7 469 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 FZR1Q9UM11 496 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 LOC400499M0QZD8 3231 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 ZFHX4Q86UP3 3567 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 P0C879 139 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 TRAT1Q6PIZ9 186 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 OR52L2PQ8NGH6 319 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
UBE3D-201ENST00000237186 SRRM5B3KS81 715 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 IFNA5P01569 189 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 OR8U8P0C7N1 319 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 ZNF16P17020 682 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-201ENST00000237186 TIMP3P35625 211 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 GABRA2P47869 451 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 HTD2P86397 168 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 KRBOX4Q5JUW0 171 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 ZNF474Q6S9Z5 364 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-201ENST00000237186 FAM216AQ8WUB2 273 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 NINJ1Q92982 152 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 C5orf30Q96GV9 206 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 OR2D2Q9H210 308 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 PSENENQ9NZ42 101 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 KIAA1456Q9P272 454 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 FAM215AQ9Y5M1 114 aa13.54□□□□□ -0.24
UBE3D-201ENST00000237186 PTPRZ1P23471 2315 aaPredicted RBP13.54□□□□□ -0.24
UBE3D-201ENST00000237186 FRYQ5TBA9 3013 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 TRAV1-1A0A0B4J248 108 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 ZNF737O75373 536 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 IGHV3-13P01766 116 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 PRDX2P32119 198 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 RPL30P62888 115 aaKnown RBP13.53□□□□□ -0.24
UBE3D-201ENST00000237186 MSMPQ1L6U9 139 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 CD177Q8N6Q3 437 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 MRGPRDQ8TDS7 321 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 PARD6GQ9BYG4 376 aaPredicted RBP13.53□□□□□ -0.24
UBE3D-201ENST00000237186 EGLN1Q9GZT9 426 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 TUBA4BQ9H853 241 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 MED19A0JLT2 244 aaPredicted RBP13.53□□□□□ -0.24
UBE3D-201ENST00000237186 COLCA2A8K830 154 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 H3BP45 60 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 C15orf65H3BRN8 121 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 ADH4P08319 380 aa13.53□□□□□ -0.24
UBE3D-201ENST00000237186 GLRXP35754 106 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms