RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PPP1CAP62136 330 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 SNRNP40Q96DI7 357 aaKnown RBP9.76□□□□□ -0.85
MSH6-201ENST00000234420 S1PR5Q9H228 398 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 THYN1Q9P016 225 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 CKS2P33552 79 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 PRB3Q04118 309 aaPredicted RBP9.76□□□□□ -0.85
MSH6-201ENST00000234420 HIKESHIQ53FT3 197 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 OVCH2Q7RTZ1 564 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 GBGT1Q8N5D6 347 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 CDC42EP3Q9UKI2 254 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 ANKRD20A5PA0PJZ0 165 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
MSH6-201ENST00000234420 CCL8P80075 99 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 AMER3Q8N944 861 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 C4orf45Q96LM5 186 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 VGLL1Q99990 258 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 PFN3P60673 137 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 KHDC3LQ587J8 217 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 PWWP2BQ6NUJ5 590 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 NPFFR1Q9GZQ6 430 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 WNT16Q9UBV4 365 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 CLN8Q9UBY8 286 aa9.76□□□□□ -0.85
MSH6-201ENST00000234420 SYNGR2O43760 224 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 NGFP01138 241 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 HBZP02008 142 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 PMELP40967 661 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 GPR6P46095 362 aaPredicted RBP9.75□□□□□ -0.85
MSH6-201ENST00000234420 FUT6P51993 359 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 BIVMQ86UB2 503 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 LSM10Q969L4 123 aaKnown RBP9.75□□□□□ -0.85
MSH6-201ENST00000234420 PKIBQ9C010 78 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 OPN4Q9UHM6 478 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 FREM3P0C091 2139 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 GP1BAP07359 652 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 MEF2CQ06413 473 aaPredicted RBP9.75□□□□□ -0.85
MSH6-201ENST00000234420 RNPS1Q15287 305 aaKnown RBP9.75□□□□□ -0.85
MSH6-201ENST00000234420 FAHD1Q6P587 224 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 MORN4Q8NDC4 146 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 LRP12Q9Y561 859 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 NFAT5O94916 1531 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 NUBP1P53384 320 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 OR8G5Q8NG78 346 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 HOXD4P09016 255 aaPredicted RBP9.75□□□□□ -0.85
MSH6-201ENST00000234420 ABHD17CQ6PCB6 329 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 OR2V2Q96R30 315 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 MPDU1O75352 247 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 RTL10Q7L3V2 364 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 RARRES2Q99969 163 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 TRAV8-6A0A0B4J262 113 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 SRSF7Q16629 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
MSH6-201ENST00000234420 ZNF774Q6NX45 483 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 KCNE3Q9Y6H6 103 aa9.75□□□□□ -0.85
MSH6-201ENST00000234420 FGF17O60258 216 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 GPR3P46089 330 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 LCN2P80188 198 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
MSH6-201ENST00000234420 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 MEIG1Q5JSS6 88 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 TMEM70Q9BUB7 260 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 CXorf1O96002 111 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 ZNF658BQ4V348 819 aaPredicted RBP9.74□□□□□ -0.85
MSH6-201ENST00000234420 HSPB2A8KAH6 182 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 EWSR1Q01844 656 aaKnown RBP eCLIP9.74□□□□□ -0.855e-7■■■■□ 21.4
MSH6-201ENST00000234420 HSPB2Q16082 182 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 OR1K1Q8NGR3 316 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 FAM222BQ8WU58 562 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 FFAR1O14842 300 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 NKX2-8O15522 239 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 SRIP30626 198 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 C1orf185Q5T7R7 199 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 ATP1A1-AS1Q5TC04 95 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 ANKRD37Q7Z713 158 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 STARD10Q9Y365 291 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 LOC285556D6RIA3 1793 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 MT-ND6P03923 174 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 PCMT1P22061 227 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 FOXL2P58012 376 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 PCOLCEQ15113 449 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 KISS1Q15726 138 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 FAM74A4Q5TZK3 123 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 AQP10Q96PS8 301 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 PMCHL2Q9BQD1 86 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 SOSTQ9BQB4 213 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 PLSCR2Q9NRY7 297 aa9.74□□□□□ -0.85
MSH6-201ENST00000234420 APOMO95445 188 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 ZNF117Q03924 483 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 PMS2CLQ68D20 193 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 MRAPQ8TCY5 172 aa9.73□□□□□ -0.85
MSH6-201ENST00000234420 COL11A1P12107 1806 aaPredicted RBP9.73□□□□□ -0.85
MSH6-201ENST00000234420 NDUFB4O95168 129 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms