RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 Q6ZPA2 131 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF738Q8NE65 137 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 TSTD1Q8NFU3 115 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 CADM4Q8NFZ8 388 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 IMMP2LQ96T52 175 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 LYRM2Q9NU23 88 aaPredicted RBP12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 LILRA1O75019 489 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF596Q8TC21 504 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 R4GN57 208 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 TNFSF11O14788 317 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 DUX1O43812 170 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 EGR1P18146 543 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 SELENOHQ8IZQ5 122 aaKnown RBP12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 CISD1Q9NZ45 108 aaKnown RBP12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 NPIPB13A6NJU9 1138 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 GDF9O60383 454 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 CDS2O95674 445 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 TAS2R30P59541 319 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 CNN3Q15417 329 aaKnown RBP12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 STARD4Q96DR4 205 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 KNTC1P50748 2209 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 MAP1BP46821 2468 aaKnown RBP12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 F6UZH7 168 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 TDGF1P13385 188 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 RAC1P63000 192 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 UBE2V1Q13404 147 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 HLA-BQ31612 363 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 Q6ZWC4 215 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 OR2M3Q8NG83 312 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 OR5AU1Q8NGC0 362 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 SGCZQ96LD1 299 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 PCED1AQ9H1Q7 454 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 HS3ST1O14792 307 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 PDCD6O75340 191 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF32P17041 273 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 RIPPLY2Q5TAB7 128 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 SELENOKQ9Y6D0 94 aa12.12□□□□□ -0.47
PCDHB3-201ENST00000231130 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 A0A0G2JRQ6 117 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF816-ZNF321PA0A0X1KG74 233 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 EN2P19622 333 aaPredicted RBP12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 DTYMKP23919 212 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 NUDT11Q96G61 164 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 DIRC3C9JPN6 131 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 ZFAND5O76080 213 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 SERPINE2P07093 398 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 DEFA4P12838 97 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 RDH5Q92781 318 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 DECR2Q9NUI1 292 aa12.11□□□□□ -0.47
PCDHB3-201ENST00000231130 GYPAP02724 150 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 IL3RAP26951 378 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 CCR5P51681 352 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 PMP22Q01453 160 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 ODF3L1Q8IXM7 274 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 CISD2Q8N5K1 135 aaKnown RBP12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF784Q8NCA9 323 aaPredicted RBP12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 RASL10BQ96S79 203 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 WNT10AQ9GZT5 417 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 PARLQ9H300 379 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 NDUFB8O95169 186 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 PMCHP20382 165 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 PSMB3P49720 205 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 SUMO3P55854 103 aaPredicted RBP12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 SLC25A22Q9H936 323 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF732B4DXR9 585 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 PTGDSP41222 190 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 MSMO1Q15800 293 aa12.1□□□□□ -0.47
PCDHB3-201ENST00000231130 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms