RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 HSD17B10Q99714 261 aaKnown RBP11.83□□□□□ -0.52
NFKB1-201ENST00000226574 TMEM147Q9BVK8 224 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 PITX3O75364 302 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 CRISP2P16562 243 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 PAX6P26367 422 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 OR4P4Q8NGL7 312 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
NFKB1-201ENST00000226574 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 SF3B5Q9BWJ5 86 aaKnown RBP11.83□□□□□ -0.52
NFKB1-201ENST00000226574 A0A1W2PR77 199 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-201ENST00000226574 IER3P46695 156 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
NFKB1-201ENST00000226574 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 CYYR1Q96J86 154 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-201ENST00000226574 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 PITPNC1Q9UKF7 332 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 RNF224P0DH78 156 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 RPS23P62266 143 aaKnown RBP11.82□□□□□ -0.52
NFKB1-201ENST00000226574 MZT1Q08AG7 82 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 SLC25A40Q8TBP6 338 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 SLC35E1Q96K37 410 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 SRD5A3Q9H8P0 318 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 TUBD1Q9UJT1 453 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 OR5B21A6NL26 309 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 C9JQL5 133 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
NFKB1-201ENST00000226574 CFHR1Q03591 330 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 VAMP3Q15836 100 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 MDP1Q86V88 176 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 C10orf35Q96D05 121 aa11.82□□□□□ -0.52
NFKB1-201ENST00000226574 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 ZNF253O75346 499 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 DEFA4P12838 97 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 FOXO1Q12778 655 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 OR1L1Q8NH94 360 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 WNT5BQ9H1J7 359 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 ZFHX2Q9C0A1 2572 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 LINC00271P0C7V0 271 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 TPPP2P59282 170 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 STUMQ69YW2 141 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 BLNKQ8WV28 456 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 TAAR9Q96RI9 348 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 LYRM2Q9NU23 88 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 TRPM7Q96QT4 1865 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 A0A1B0GU03 582 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 HAND1O96004 215 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 HES1Q14469 280 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 KIAA1644Q3SXP7 199 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 WFDC8Q8IUA0 241 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 H1FOOQ8IZA3 346 aaPredicted RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 CARFQ8N187 725 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 OR10X1Q8NGY0 326 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 LYZL4Q96KX0 146 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 TAAR6Q96RI8 345 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 MRPL13Q9BYD1 178 aaKnown RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 RAB9BQ9NP90 201 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 MPC1Q9Y5U8 109 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 PRRC2CQ9Y520 2896 aaKnown RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 CNIH1O95406 144 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 HSPB1P04792 205 aaKnown RBP11.81□□□□□ -0.52
NFKB1-201ENST00000226574 MPLP40238 635 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 FGF12P61328 243 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 VKORC1L1Q8N0U8 176 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 ATP23Q9Y6H3 246 aa11.81□□□□□ -0.52
NFKB1-201ENST00000226574 FGF16O43320 207 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 PSG5Q15238 335 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 DEFB109BQ30KR1 87 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 TBX15Q96SF7 602 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 SIRT7Q9NRC8 400 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 A0A0G2JMM0 328 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 A0A1W2PPB8 328 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 A0A1W2PRS3 328 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 COLCA2A8K830 154 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 KIR3DP1A8MWS1 328 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 RHBDL1O75783 438 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 Q8WTZ3 238 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 DLL3Q9NYJ7 618 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 J3QT63 122 aa11.8□□□□□ -0.52
NFKB1-201ENST00000226574 CELA3AP09093 270 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms