RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 SPINK2P20155 84 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 Q6ZRM9 215 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 HIPK2Q9H2X6 1198 aa12.16□□□□□ -0.46
SHPK-201ENST00000225519 TRAPPC6AO75865 159 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 CD38P28907 300 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 TPPP2P59282 170 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 DIRC2Q96SL1 478 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 CTXND1A0A1B0GTU2 59 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 SIAH2O43255 324 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 VAMP5O95183 116 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 CRYAAP02489 173 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 HNF1AP20823 631 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 GCH1P30793 250 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 PSMF1Q92530 271 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 KIR2DL5BA0A0G2JN68 375 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 KIR2DL5BA0A0G2JPC4 375 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 EDN3P14138 238 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 TFPI2P48307 235 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 CLDN15P56746 228 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 BAGE3Q86Y29 109 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 BAGE2Q86Y30 109 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 MKXQ8IYA7 352 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 KIR2DL5AQ8N109 375 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 TMEM54Q969K7 222 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 SPACA9Q96E40 222 aaPredicted RBP12.15□□□□□ -0.46
SHPK-201ENST00000225519 TUBG2Q9NRH3 451 aa12.15□□□□□ -0.46
SHPK-201ENST00000225519 LOC102725191A0A1B0GVB3 256 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 WDR1O75083 606 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 UBE2ZQ9H832 354 aaPredicted RBP12.14□□□□□ -0.47
SHPK-201ENST00000225519 IL36GQ9NZH8 169 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 IL36RNQ9UBH0 155 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 MDFIC2A0A1B0GVS7 189 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 ZNHIT1O43257 154 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
SHPK-201ENST00000225519 GPM6AP51674 278 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 BTF3L4Q96K17 158 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 MSL2Q9HCI7 577 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 TNFSF11O14788 317 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 SELEP16581 610 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 TCF23Q7RTU1 214 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 NFAM1Q8NET5 270 aaPredicted RBP12.14□□□□□ -0.47
SHPK-201ENST00000225519 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 LPAR2Q9HBW0 351 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 TMEM9BQ9NQ34 198 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 CHD9Q3L8U1 2897 aa12.14□□□□□ -0.47
SHPK-201ENST00000225519 TUSC2O75896 110 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 COX5AP20674 150 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 CRYGSP22914 178 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 CD82P27701 267 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 MPLP40238 635 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 PTGDSP41222 190 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
SHPK-201ENST00000225519 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 OR2J1Q9GZK6 312 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 OR2W1Q9Y3N9 320 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 EPOPA6NHQ4 379 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 SYNGR3O43761 229 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 LINC00614P0C842 121 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 FKBP2P26885 142 aaKnown RBP12.13□□□□□ -0.47
SHPK-201ENST00000225519 RHBDD2Q6NTF9 364 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 NUPR1O60356 82 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 LILRA1O75019 489 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
SHPK-201ENST00000225519 LCN2P80188 198 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 Q6ZS52 159 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 RASL10BQ96S79 203 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
SHPK-201ENST00000225519 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
SHPK-201ENST00000225519 KITLGP21583 273 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 WDYHV1Q96HA8 205 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 LRP4O75096 1905 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 PSG4Q00888 419 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 AAED1Q7RTV5 226 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 OR56B2PQ8NGI1 322 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 IGKV1-6A0A0C4DH72 117 aa12.12□□□□□ -0.47
SHPK-201ENST00000225519 hCG_38984A0A1B0GV85 526 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms