RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 IL18BPO95998 194 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 IFNA17P01571 189 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZNF14P17017 642 aaPredicted RBP21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 ERVK11-1P61568 191 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 KRBOX4Q5JUW0 171 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZNF497Q6ZNH5 498 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 RARRES2Q99969 163 aa21.06■□□□□ 0.96
RUNDC3A-201ENST00000225441 A6NLC8 198 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 FAM90A26D6RGX4 464 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 GPR37O15354 613 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 SCAF4O95104 1147 aaKnown RBP21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 GABRA6Q16445 453 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 YPEL4Q96NS1 127 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 SIRT7Q9NRC8 400 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 WIPI2Q9Y4P8 454 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 ARID1AO14497 2285 aa21.05■□□□□ 0.96
RUNDC3A-201ENST00000225441 S100A9P06702 114 aaKnown RBP21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 CCL20P78556 96 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZNF154Q13106 437 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZBTB34Q8NCN2 500 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 GMPPAQ96IJ6 420 aaPredicted RBP21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 PRSS50Q9UI38 385 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 EIF3GO75821 320 aaKnown RBP eCLIP21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 OR2C1O95371 312 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 PSG2P11465 335 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 SELEP16581 610 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 CA6P23280 308 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 TDGF1P3P51864 188 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 ICAM4Q14773 271 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZNF146Q15072 292 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 OR2T2Q6IF00 324 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 C5orf24Q7Z6I8 188 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 SLC35E3Q7Z769 313 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 MDP1Q86V88 176 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 CLDND2Q8NHS1 167 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 RNASE11Q8TAA1 199 aaKnown RBP21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 SCGB1C1Q8TD33 95 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 ZNF488Q96MN9 340 aa21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 MBNL3Q9NUK0 354 aaKnown RBP21.04■□□□□ 0.96
RUNDC3A-201ENST00000225441 PCP4L1A6NKN8 68 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 B4DEV8 164 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 H3BQ15 152 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 TNFSF12O43508 249 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 SYNGR2O43760 224 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 IGHV2-5P01817 119 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 TMEM217Q8N7C4 229 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 ABHD14AQ9BUJ0 271 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 C20orf24Q9BUV8 137 aa21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 PUS1Q9Y606 427 aaKnown RBP eCLIP21.03■□□□□ 0.96
RUNDC3A-201ENST00000225441 TMEM210A6NLX4 147 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 RPS23P62266 143 aaKnown RBP21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 HBG1P69891 147 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 HBG2P69892 147 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 SERF2P84101 59 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 TESK1Q15569 626 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 MSMO1Q15800 293 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 FAM24BQ8N5W8 94 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 MMP24Q9Y5R2 645 aa21.02■□□□□ 0.96
RUNDC3A-201ENST00000225441 SH2D1BO14796 132 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 LILRA1O75019 489 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 EPHA1P21709 976 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 FIP1L1Q6UN15 594 aaKnown RBP21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 MBD3L1Q8WWY6 194 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 ISOC2Q96AB3 205 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 SNRNP40Q96DI7 357 aaKnown RBP21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 MUCL1Q96DR8 90 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 TVP23CQ96ET8 276 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 SEBOXQ9HB31 216 aaPredicted RBP21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 ATMQ13315 3056 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 A0A0G2JRQ6 117 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 SLC33A1O00400 549 aaPredicted RBP21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 RAC2P15153 192 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 TGFBR3Q03167 851 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 PMS2P11Q13670 270 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 HEPN1Q6WQI6 88 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 C9orf106Q8NAJ2 232 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 OR51H1Q8NH63 302 aa21.01■□□□□ 0.95
RUNDC3A-201ENST00000225441 BOD1L1Q8NFC6 3051 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 RHBDL1O75783 438 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 IGLV2-14P01704 120 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 PGA5P0DJD9 388 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 SLC25A24Q6NUK1 477 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 ZNF295-AS1Q8N0V1 137 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 GPHA2Q96T91 129 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 NIPSNAP3BQ9BS92 247 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 TRAPPC2LQ9UL33 140 aa21■□□□□ 0.95
RUNDC3A-201ENST00000225441 LOC102723971A0A1B0GUV8 181 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 A0A1W2PPE2 198 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 WDR1O75083 606 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 OR2H2O95918 312 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 DAOP14920 347 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 UBE2KP61086 200 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 B2MP61769 119 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 KLRB1Q12918 225 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 GUSBP1Q15486 140 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 PRR30Q53SZ7 412 aaPredicted RBP20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 ZNF429Q86V71 674 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 C17orf78Q8N4C9 275 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 SCCPDHQ8NBX0 429 aa20.99■□□□□ 0.95
RUNDC3A-201ENST00000225441 FAM57AQ8TBR7 257 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms