RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TMUB1Q9BVT8 246 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 NPTNQ9Y639 398 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 LYPD3O95274 346 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 PCOLCEQ15113 449 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 MRGPRGQ86SM5 289 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 NR2C2APQ86WQ0 139 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 IL17BQ9UHF5 180 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.81
NOD1-201ENST00000222823 MED12Q93074 2177 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 J3QR06 171 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 CRYBA1P05813 215 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 CHRNA10Q9GZZ6 450 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
NOD1-201ENST00000222823 A0A1W2PPE3 182 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 C17orf51A8MQB3 221 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 ERVH48-1M5A8F1 160 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 TIAF1O95411 115 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 COX6A1P12074 109 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 PRF1P14222 555 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 HTR1DP28221 377 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 COL10A1Q03692 680 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 CDCP2Q5VXM1 449 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 SSX8Q7RTT4 187 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 HOXD4P09016 255 aaPredicted RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 UCNP55089 124 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 EGR4Q05215 589 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 CBLN2Q8IUK8 224 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 PRSS3P2Q8NHM4 247 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 MARS2Q96GW9 593 aaKnown RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 MS4A10Q96PG2 267 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 F2RL2O00254 374 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 NHLH2Q02577 135 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 KRTCAP3Q53RY4 240 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 C1orf185Q5T7R7 199 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 SLC25A10Q9UBX3 287 aaPredicted RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 ARHGEF17Q96PE2 2063 aaPredicted RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 PAGE4O60829 102 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 SCTP09683 121 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 MPV17P39210 176 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 ERVS71-1P61550 626 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 OR8I2Q8N0Y5 310 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 TMEM252Q8N6L7 170 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 OPN3Q9H1Y3 402 aaPredicted RBP9.95□□□□□ -0.82
NOD1-201ENST00000222823 FAM206AQ9NX38 181 aa9.95□□□□□ -0.82
NOD1-201ENST00000222823 PLXNA4Q9HCM2 1894 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 RAB29O14966 203 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 FAM157CP0CG43 387 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 RANP62826 216 aaKnown RBP9.94□□□□□ -0.82
NOD1-201ENST00000222823 NAAAQ02083 359 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 C1QTNF12Q5T7M4 302 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 TEPPQ6URK8 271 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 RHOVQ96L33 236 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 CTXND1A0A1B0GTU2 59 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 REG1BP48304 166 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 MMDQ15546 238 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 ZNF826PQ6ZT77 177 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 NFAM1Q8NET5 270 aaPredicted RBP9.94□□□□□ -0.82
NOD1-201ENST00000222823 OR2V2Q96R30 315 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 PRDM6Q9NQX0 595 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 COA4Q9NYJ1 87 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 HBZP02008 142 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 APCDD1LQ8NCL9 501 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 OR4X1Q8NH49 305 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 CCL13Q99616 98 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 SRD5A3Q9H8P0 318 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
NOD1-201ENST00000222823 CXCL2P19875 107 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 TCL1AP56279 114 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 WDR73Q6P4I2 378 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 WNT2BQ93097 391 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 UBTD1Q9HAC8 227 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 CLEC5AQ9NY25 188 aa9.94□□□□□ -0.82
NOD1-201ENST00000222823 NOTCH3Q9UM47 2321 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A10PA6NDY2 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A8PA6NJQ4 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 NPIPB13A6NJU9 1138 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A7PA6NKC0 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 DHRS7CA6NNS2 312 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A22PA8MWA6 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 FAM90A23PA8MXZ1 464 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 NPIPB4C9JG80 1138 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 MFNGO00587 321 aa9.93□□□□□ -0.82
NOD1-201ENST00000222823 OR2H2O95918 312 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms