RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 M0R143 59 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 EGR1P18146 543 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PTPRZ1P23471 2315 aaPredicted RBP11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 A0A1W2PPC1 479 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 CCL21O00585 134 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 OR2A4O95047 310 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PRDX2P32119 198 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 PCED1AQ9H1Q7 454 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 RBKSQ9H477 322 aa11.8□□□□□ -0.52
TGFBR3-201ENST00000212355 LY75O60449 1722 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV3-66A0A0C4DH42 116 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 SMPD2O60906 423 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 LSM6P62312 80 aaKnown RBP11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 TMEM251Q8N6I4 163 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 OR2V2Q96R30 315 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 PTPRFP10586 1907 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 HBZP02008 142 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 RAG2P55895 527 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 FAHD2BQ6P2I3 314 aaPredicted RBP11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 OR1L1Q8NH94 360 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 FAHD2AQ96GK7 314 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 CHST5Q9GZS9 411 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 F11RQ9Y624 299 aaKnown RBP11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 A0A1W2PQD3 144 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 EPOPA6NHQ4 379 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 ADIPOR1Q96A54 375 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 H0YL77 283 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 PEAR1Q5VY43 1037 aaPredicted RBP11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 TMEM167BQ9NRX6 74 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 OR2H2O95918 312 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 HLA-DQB1P01920 261 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 HOXC4P09017 264 aaPredicted RBP11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 VDAC1P21796 283 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 TEPPQ6URK8 271 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 ST6GALNAC3Q8NDV1 305 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 KLK15Q9H2R5 256 aa11.79□□□□□ -0.52
TGFBR3-201ENST00000212355 DIRC3C9JPN6 131 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 NPBWR2P48146 333 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 GBGT1Q8N5D6 347 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 ERVH48-1M5A8F1 160 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 HIST1H1BP16401 226 aaKnown RBP11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 PTX4Q96A99 478 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 IGKV3-20P01619 116 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 ATP6V1FQ16864 119 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 MIC13Q5XKP0 118 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 RAB1CQ92928 201 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 PDCD11Q14690 1871 aaKnown RBP11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 C9orf172C9J069 976 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 CXorf1O96002 111 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 RPLP1P05386 114 aaKnown RBP11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 LY6EQ16553 131 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 PAXXQ9BUH6 204 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 CHODLQ9H9P2 273 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV3OR16-13A0A075B7E8 117 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 IGHV3-74A0A0B4J1X5 117 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 RPL31P62899 125 aaKnown RBP11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 KCNE5Q9UJ90 142 aa11.78□□□□□ -0.52
TGFBR3-201ENST00000212355 ASAH2BP0C7U1 165 aa11.77□□□□□ -0.52
TGFBR3-201ENST00000212355 WDR73Q6P4I2 378 aa11.77□□□□□ -0.52
TGFBR3-201ENST00000212355 NUBP1P53384 320 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 HOGA1Q86XE5 327 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 DEDDO75618 318 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 UBE2V2Q15819 145 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 PRDM6Q9NQX0 595 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 COL4A5P29400 1685 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 IGHV1-45A0A0A0MS14 117 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 IGSF23A1L1A6 192 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 HAX1O00165 279 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 OR10J1P30954 320 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 CEACAM3P40198 252 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 CRYBA2P53672 197 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 OR5R1Q8NH85 324 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 ITLN1Q8WWA0 313 aa11.77□□□□□ -0.53
TGFBR3-201ENST00000212355 PITX3O75364 302 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 PGA4P0DJD7 388 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 MFAP2P55001 183 aa11.76□□□□□ -0.53
TGFBR3-201ENST00000212355 FBXW9Q5XUX1 488 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms