RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 GGNBP1Q5YKI7 109 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 CCDC71LQ8N9Z2 235 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 CCL17Q92583 94 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 LRRC30A6NM36 301 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 FAM90A1Q86YD7 464 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 SPAG16Q8N0X2 631 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 AIFM2Q9BRQ8 373 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 CARHSP1Q9Y2V2 147 aaKnown RBP18.41■□□□□ 0.54
HOXC8-201ENST00000040584 WIPI2Q9Y4P8 454 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 POMT1Q9Y6A1 747 aa18.41■□□□□ 0.54
HOXC8-201ENST00000040584 E5RGE8 158 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 SLC33A1O00400 549 aaPredicted RBP18.4■□□□□ 0.54
HOXC8-201ENST00000040584 PSG2P11465 335 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 CTRB1P17538 263 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 CTRB2Q6GPI1 263 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 ATRAIDQ6UW56 229 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 NEK7Q8TDX7 302 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 RTN4IP1Q8WWV3 396 aaPredicted RBP18.4■□□□□ 0.54
HOXC8-201ENST00000040584 NSG2Q9Y328 171 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 TENM4Q6N022 2769 aa18.4■□□□□ 0.54
HOXC8-201ENST00000040584 IGHV1-69-2A0A0G2JMI3 117 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 COX6B1P14854 86 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 TMEM187Q14656 261 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 Q6ZS49 121 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 FAM185AQ8N0U4 392 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 CD177Q8N6Q3 437 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 CLRN3Q8NCR9 226 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 DEFB108BQ8NET1 73 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 RAB1BQ9H0U4 201 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 OR2S2Q9NQN1 319 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 TMEM106BQ9NUM4 274 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 METRNQ9UJH8 293 aa18.39■□□□□ 0.54
HOXC8-201ENST00000040584 FBXO9Q9UK97 447 aaPredicted RBP18.39■□□□□ 0.54
HOXC8-201ENST00000040584 RAI1Q7Z5J4 1906 aaPredicted RBP18.39■□□□□ 0.53
HOXC8-201ENST00000040584 IGKV1D-17A0A075B6S4 117 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 LMO1P25800 156 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 PRDX2P32119 198 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 SULT1A2P50226 295 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 SRPXP78539 464 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 GPR157Q5UAW9 335 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 LGI3Q8N145 548 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 MOB3AQ96BX8 217 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 SEC11CQ9BY50 192 aa18.39■□□□□ 0.53
HOXC8-201ENST00000040584 TMEM178BH3BS89 294 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 H7C1Q1 480 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 NAPSAO96009 420 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 FCGR2CP31995 323 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 TLE4Q04727 773 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 Q6ZPA2 131 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 LIAT1Q6ZQX7 453 aa18.38■□□□□ 0.53
HOXC8-201ENST00000040584 LYNX1G3V0Z9 82 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 IFNL4K9M1U5 179 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 PSPNO60542 156 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 SNAPINO95295 136 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 LYNX1P0DP58 116 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 GABRA2P47869 451 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 COL10A1Q03692 680 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 RSRP1Q9BUV0 290 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 PLEKHF2Q9H8W4 249 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 SEBOXQ9HB31 216 aaPredicted RBP18.37■□□□□ 0.53
HOXC8-201ENST00000040584 PARP11Q9NR21 331 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 F8W036 122 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 LY6HO94772 140 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 COL8A2P25067 703 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 CDKN1AP38936 164 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 CAV2P51636 162 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 HERV-K104P61576 105 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 SHEQ5VZ18 495 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 TMEM268Q5VZI3 342 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 RPL7L1Q6DKI1 246 aaKnown RBP18.37■□□□□ 0.53
HOXC8-201ENST00000040584 C1orf87Q8N0U7 546 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 UBAC2Q8NBM4 344 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 TOMM40LQ969M1 308 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 C18orf12Q96KH6 178 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 TMED3Q9Y3Q3 217 aa18.37■□□□□ 0.53
HOXC8-201ENST00000040584 OOEPA6NGQ2 149 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 COL8A1P27658 744 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 HFEQ30201 348 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 LIME1Q9H400 295 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 TREM1Q9NP99 234 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 SLC2A9Q9NRM0 540 aa18.36■□□□□ 0.53
HOXC8-201ENST00000040584 DSCAMO60469 2012 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 BORCS7-ASMTA0A0B4J1R7 106 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 UQCC1Q9NVA1 299 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 GYPAP02724 150 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 OR5AC1P0C628 307 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 F2RL1P55085 397 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 TMEM33P57088 247 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 TEX36Q5VZQ5 186 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 STUMQ69YW2 141 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 FOXRED2Q8IWF2 684 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 RIMS4Q9H426 269 aaPredicted RBP18.35■□□□□ 0.53
HOXC8-201ENST00000040584 LSM5Q9Y4Y9 91 aaKnown RBP18.35■□□□□ 0.53
HOXC8-201ENST00000040584 TANC2Q9HCD6 1990 aa18.35■□□□□ 0.53
HOXC8-201ENST00000040584 USP9YO00507 2555 aaPredicted RBP18.34■□□□□ 0.53
HOXC8-201ENST00000040584 AKAP6Q13023 2319 aa18.34■□□□□ 0.53
HOXC8-201ENST00000040584 PPIAL4EA0A075B759 164 aa18.34■□□□□ 0.53
HOXC8-201ENST00000040584 PPIAL4DF5H284 164 aa18.34■□□□□ 0.53
HOXC8-201ENST00000040584 NUPL2O15504 423 aaKnown RBP18.34■□□□□ 0.53
HOXC8-201ENST00000040584 GPR137BO60478 399 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms