RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ATXN7O15265 892 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ADAM20O43506 726 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PITX3O75364 302 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 CD3EP07766 207 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ADORA2A-AS1P86434 159 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ID3Q02535 119 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 TLE1Q04724 770 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 EDDM3AQ14507 147 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 GNMTQ14749 295 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM219AQ8IW50 185 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PDZD9Q8IXQ8 264 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PLPPR2Q96GM1 343 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PIEZO2Q9H5I5 2752 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 BOD1L1Q8NFC6 3051 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 GPR137BO60478 399 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 CYB5R3P00387 301 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PPP1CCP36873 323 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 NKX2-1P43699 371 aaPredicted RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM201AQ5SY85 155 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 COMMD7Q86VX2 200 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 LRRC20Q8TCA0 184 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 EDARADDQ8WWZ3 215 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 CITED4Q96RK1 184 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
RTFDC1-201ENST00000023939 PLCE1Q9P212 2302 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 LAMA5O15230 3695 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 A0A1B0GW55 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 LGALS8O00214 317 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 ITGB1BP1O14713 200 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 SIGLEC5O15389 551 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 YPEL1O60688 119 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 IGKV1-39P01597 117 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 IGKV1D-39P04432 117 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L2P0CJ85 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L3P0CJ86 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L4P0CJ87 422 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L5P0CJ88 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L6P0CJ89 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4L7P0CJ90 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 APOBEC3AP31941 199 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 CCL8P80075 99 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 ZNF66Q6ZN08 573 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 AGMATQ9BSE5 352 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 MS4A5Q9H3V2 200 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 LINC00574Q9H8X3 128 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 DUX4Q9UBX2 424 aa11.9□□□□□ -0.5
RTFDC1-201ENST00000023939 B9A039 149 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 LOXL3P58215 753 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 MST1LQ2TV78 715 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 TMEM30BQ3MIR4 351 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 CORO2AQ92828 525 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 SAP30LQ9HAJ7 183 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 ZC4H2Q9NQZ6 224 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 JTBO76095 146 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 PVALBP20472 110 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 TMEM33P57088 247 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 CATR1Q13166 79 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 MORN2Q502X0 79 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 RFESDQ8TAC1 157 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 REG4Q9BYZ8 158 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 CALYQ9NYX4 217 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 FBXL17Q9UF56 701 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 GAB2Q9UQC2 676 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 RNF115Q9Y4L5 304 aa11.89□□□□□ -0.51
RTFDC1-201ENST00000023939 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 NKX6-3A6NJ46 265 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 KIAA1324LA8MWY0 1029 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 TMEM178BH3BS89 294 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 FGF16O43320 207 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 IGKV1-5P01602 117 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 EDDM3BP56851 147 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 EIF5AL1Q6IS14 154 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 FAM53AQ6NSI3 398 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 EIF4E3Q8N5X7 224 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 GALNT11Q8NCW6 608 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 LINC01560Q8TB33 94 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
RTFDC1-201ENST00000023939 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms