RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF107Q9UII5 783 aaPredicted RBP12.38□□□□□ -0.43
ERCC1-201ENST00000013807 I3L521 148 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 RGS11O94810 467 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 NDUFA3O95167 84 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 GNAO1P09471 354 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 CHATP28329 748 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 INSL3P51460 131 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 ACTBP60709 375 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 GNMTQ14749 295 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 MMDQ15546 238 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 HMGN3Q15651 99 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
ERCC1-201ENST00000013807 ZNF491Q8N8L2 437 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 MINDY2Q8NBR6 621 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 OR52L2PQ8NGH6 319 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 PHYHIPQ92561 330 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 TFAP2CQ92754 450 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 GALMQ96C23 342 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
ERCC1-201ENST00000013807 IGHV7-81A0A0B4J1V7 117 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 MYL12BO14950 172 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 NAPSAO96009 420 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 PPP1CCP36873 323 aaKnown RBP12.36□□□□□ -0.43
ERCC1-201ENST00000013807 LUMP51884 338 aaPredicted RBP12.36□□□□□ -0.43
ERCC1-201ENST00000013807 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
ERCC1-201ENST00000013807 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 CYYR1Q96J86 154 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 RITA1Q96K30 269 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 GHITMQ9H3K2 345 aa12.36□□□□□ -0.43
ERCC1-201ENST00000013807 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 NBR2O15453 112 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 QRFPP83859 136 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 ACSM3Q53FZ2 586 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 C19orf54Q5BKX5 351 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 OGFRL1Q5TC84 451 aaPredicted RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 AHSA2Q719I0 299 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 LRRTM1Q86UE6 522 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 RBMXL1Q96E39 390 aaKnown RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 SULT4A1Q9BR01 284 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
ERCC1-201ENST00000013807 ANKRD60Q9BZ19 345 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
ERCC1-201ENST00000013807 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 TRBV6-6A0A0A6YYG2 114 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 OR8U8P0C7N1 319 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
ERCC1-201ENST00000013807 RAB9AP51151 201 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 RAB25P57735 213 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 NKAPLQ5M9Q1 402 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 C5orf24Q7Z6I8 188 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 OR2AK2Q8NG84 335 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 KCNG3Q8TAE7 436 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 AGMATQ9BSE5 352 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 FAAP24Q9BTP7 215 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 PIPOXQ9P0Z9 390 aa12.34□□□□□ -0.43
ERCC1-201ENST00000013807 TMEM14DPA8MWL7 114 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 G3V318 75 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 SLC22A1O15245 554 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 ATP6V0E1O15342 81 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 SRMP19623 302 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 CNTFRP26992 372 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 HTR2CP28335 458 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 OR3A3P47888 321 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 UNC119Q13432 240 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
ERCC1-201ENST00000013807 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 C6orf201Q7Z4U5 140 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 FAM89BQ8N5H3 189 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 BPIFB6Q8NFQ5 453 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 OR1N2Q8NGR9 330 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 RNF5Q99942 180 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 RIMS4Q9H426 269 aaPredicted RBP12.33□□□□□ -0.44
ERCC1-201ENST00000013807 ABRACLQ9P1F3 81 aa12.33□□□□□ -0.44
ERCC1-201ENST00000013807 LSM2Q9Y333 95 aaKnown RBP12.33□□□□□ -0.44
ERCC1-201ENST00000013807 TRAV41A0A0B4J266 112 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 RAB29O14966 203 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 BPNT1O95861 308 aa12.32□□□□□ -0.44
ERCC1-201ENST00000013807 CDK1P06493 297 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms