RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Slc25a42Q8R0Y8 318 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Abhd12Q99LR1 398 aaKnown RBP7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Asb5Q9D1A4 329 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm45716A0A1B0GRQ0 93 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm17655A0A1B0GT13 591 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm14744B1AVU4 173 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr221B2RVX8 311 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Hsbp1l1B2RXB2 72 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm20708H3BKF4 155 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sp100O35892 482 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 CtsbP10605 339 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Acyp2P56375 106 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rce1P57791 329 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 McptlQ00356 246 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Trpc5osQ3UHV4 110 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Klf2Q60843 354 aaKnown RBP7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mtch1Q791T5 389 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr976Q8VF15 326 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Eef1e1Q9D1M4 174 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Cst11Q9D269 139 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm9817Q9D2M0 144 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 5430402E10RikQ9D3N5 173 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Samt4Q9D4X6 233 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Chrm2Q9ERZ4 466 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Kcne4Q9WTW3 170 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sptan1P16546 2472 aaKnown RBP7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Trav6n-7A0A075B6A6 116 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm3045A0A1D5RMA1 209 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 PomcP01193 235 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Wt1P22561 449 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Sult2a2P50236 285 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mpc1P63030 109 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gng3P63216 75 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rac2Q05144 192 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rtp3Q5QGU6 474 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ceacam10Q61400 265 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Fbxo27Q6DIA9 280 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 4930451G09RikQ8C5G4 195 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Wipi1Q8R3E3 446 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1240Q8VG73 314 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Prr23a3Q9CWP9 254 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 PthQ9Z0L6 115 aa7.43□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21858A0A087WQ24 222 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Htra4A2RT60 483 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 4930467E23RikD3Z1P8 350 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm15319E9Q637 350 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 AanatO88816 205 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Hnf1aP22361 628 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 ActbP60710 375 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ap2s1P62743 142 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Actg1P63260 375 aaKnown RBP7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ccl7Q03366 97 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tbrg1Q3UB74 406 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Cln5Q3UMW8 341 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Slc25a35Q5SWT3 300 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gp49aQ61450 303 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm21119Q8C646 350 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Lrrtm1Q8K377 522 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vrk3Q8K3G5 453 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tmed4Q8R1V4 227 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr490Q8VFD2 314 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr307Q8VFN8 313 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr539Q8VGL9 319 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mrps14Q9CR88 128 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ceacam18Q9D871 376 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Vmn1r171Q9EPS6 316 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rps2-ps6A0A140T8L5 221 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8126E9Q1N7 198 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mex3aG3UYU0 520 aaKnown RBP7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm8356J3QPD3 205 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm3532M0QWL4 194 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 CckarO08786 436 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Csf3P09920 208 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Fabp7P51880 132 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 S100a1P56565 94 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mccc2Q3ULD5 563 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dtx1Q61010 627 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dpp10Q6NXK7 797 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Msrb2Q78J03 175 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr222Q7TS30 318 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Q80X32 188 aaKnown RBP7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zadh2Q8BGC4 377 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rcc2Q8BK67 520 aaKnown RBP7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Dhrs7cQ8CHS7 311 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Ubac2Q8R1K1 345 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1132Q8VG97 308 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Atg5Q99J83 275 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Smim3Q99PE5 60 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Mpped2Q9CZJ0 294 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Iqcf5Q9DAL7 148 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Slurp1Q9Z0K7 110 aa7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Usp24B1AY13 2617 aaKnown RBP7.42□□□□□ -1.22
Trim39-201ENSMUST00000042717 Zcchc24B2RVL6 241 aaKnown RBP7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 Gm5798F7BTS7 198 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 IfnabL7MTU6 190 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 Olfr1221L7MU53 311 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 Aqp2P56402 271 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 Tspan5P62080 268 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 Rasl12Q08AT1 266 aa7.41□□□□□ -1.22
Trim39-201ENSMUST00000042717 GcdhQ60759 438 aa7.41□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms