RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PEX14	O75381	377 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	IL3RA	P26951	378 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	CLDN12	P56749	244 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	SLC25A48	Q6ZT89	311 aa	Known RBP	12	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAM89B	Q8N5H3	189 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF439	Q8NDP4	499 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR51D1	Q8NGF3	324 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR10V1	Q8NGI7	309 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	FCGR1B	Q92637	280 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAM3D	Q96BQ1	224 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	MMP27	Q9H306	513 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR2S2	Q9NQN1	319 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	STEAP1	Q9UHE8	339 aa		12	□□□□□ -0.49
PHGDH-231	ENST00000641939	IGHV1-3	A0A0C4DH29	117 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939		M0QZK8	103 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	SLC31A2	O15432	143 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	SOCS1	O15524	211 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	GAL	P22466	123 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	MYL9	P24844	172 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	PSMB9	P28065	219 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	REG1B	P48304	166 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF134	P52741	427 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	HTD2	P86397	168 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	HES1	Q14469	280 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	TMEM95	Q3KNT9	176 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	C2orf76	Q3KRA6	126 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	ABCA11P	Q4W5N1	156 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	CT45A1	Q5HYN5	189 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	STEAP3	Q658P3	488 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	MOB3B	Q86TA1	216 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	CT45A3	Q8NHU0	189 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	ST6GALNAC6	Q969X2	333 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	WNT10A	Q9GZT5	417 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	MOB4	Q9Y3A3	225 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	MEGF8	Q7Z7M0	2845 aa		11.99	□□□□□ -0.49
PHGDH-231	ENST00000641939	SHISA3	A0PJX4	238 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	FBXO24	O75426	580 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	TSPAN15	O95858	294 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	NAPSA	O96009	420 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	IGKV1D-33	P01593	117 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	IGKV1-33	P01594	117 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	AMY1A	P04745	511 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	AMY2A	P04746	511 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	CSF1	P09603	554 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	TMEM11	P17152	192 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	VEGFC	P49767	419 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF137P	P52743	207 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	HMGN3	Q15651	99 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	MORN2	Q502X0	79 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	HES5	Q5TA89	166 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	HIST2H2BD	Q6DRA6	164 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	C22orf42	Q6IC83	251 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF773	Q6PK81	442 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	WIPF2	Q8TF74	440 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	GALM	Q96C23	342 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	RIMS4	Q9H426	269 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	JPT1	Q9UK76	154 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	HSF4	Q9ULV5	492 aa		11.98	□□□□□ -0.49
PHGDH-231	ENST00000641939	NOTCH3	Q9UM47	2321 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	TRBV6-6	A0A0A6YYG2	114 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	TMEM272	A0A1B0GTI8	110 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	SH2D7	A6NKC9	451 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	IFITM5	A6NNB3	132 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	LDLRAD4	O15165	306 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	TXNL1	O43396	289 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	RGS11	O94810	467 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	LPL	P06858	475 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	CD28	P10747	220 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	RAB3B	P20337	219 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	PPP1CC	P36873	323 aa	Known RBP	11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR10A3	P58181	314 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	HNF4G	Q14541	408 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	GNMT	Q14749	295 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	ZNF880	Q6PDB4	577 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	MOB1B	Q7L9L4	216 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	C5orf24	Q7Z6I8	188 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	IZUMO1	Q8IYV9	350 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR52L2P	Q8NGH6	319 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	OR56B1	Q8NGI3	324 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	ABRACL	Q9P1F3	81 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	AK3	Q9UIJ7	227 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	RAB22A	Q9UL26	194 aa		11.97	□□□□□ -0.49
PHGDH-231	ENST00000641939	IGHV3-72	A0A0B4J1Y9	119 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	YPEL1	O60688	119 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	CD1B	P29016	333 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	FGF9	P31371	208 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	TMEM50B	P56557	158 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	EBI3	Q14213	229 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	C9orf152	Q5JTZ5	239 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	LY6G6F	Q5SQ64	297 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939		Q6ZPA2	131 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	TGIF2LX	Q8IUE1	241 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	LYG1	Q8N1E2	194 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	C5orf56	Q8N8D9	126 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	SETD6	Q8TBK2	473 aa		11.96	□□□□□ -0.49
PHGDH-231	ENST00000641939	ARHGAP5-AS1	Q96IT6	56 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms