RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 HEPN1Q6WQI6 88 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 TMEM17Q86X19 198 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 POC5Q8NA72 575 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 OR6F1Q8NGZ6 308 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 DEDD2Q8WXF8 326 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 SLC6A7Q99884 636 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 C11orf54Q9H0W9 315 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-230ENST00000641927 LINC00574Q9H8X3 128 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
PHGDH-230ENST00000641927 POLR3KQ9Y2Y1 108 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-230ENST00000641927 IGHV1-8P0DP01 117 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 PPP1CCP36873 323 aaKnown RBP14.34□□□□□ -0.11
PHGDH-230ENST00000641927 ASAH1Q13510 395 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 METTL11BQ5VVY1 283 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 ARRDC1Q8N5I2 433 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 OR51S1Q8NGJ8 323 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 LEAP2Q969E1 77 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 DACT3Q96B18 629 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-230ENST00000641927 SUCNR1Q9BXA5 334 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 JPT1Q9UK76 154 aa14.34□□□□□ -0.11
PHGDH-230ENST00000641927 NAP1L6A6NFF2 107 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 M0R1W7 72 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 IGHV4-31P0DP07 118 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 DLX1P56177 255 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 LOXL3P58215 753 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.11
PHGDH-230ENST00000641927 DCAF12L2Q5VW00 463 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 MZT2BQ6NZ67 158 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 KIR3DL3Q8N743 410 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 OR10A7Q8NGE5 316 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 TMEM186Q96B77 213 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 MSI2Q96DH6 328 aaKnown RBP14.33□□□□□ -0.11
PHGDH-230ENST00000641927 C1orf159Q96HA4 380 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 DMRTB1Q96MA1 342 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 C7orf50Q9BRJ6 194 aaKnown RBP14.33□□□□□ -0.11
PHGDH-230ENST00000641927 ZNF2Q9BSG1 426 aaPredicted RBP14.33□□□□□ -0.11
PHGDH-230ENST00000641927 PCGF1Q9BSM1 259 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 HIF1ANQ9NWT6 349 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 RDH8Q9NYR8 311 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 SCP2D1Q9UJQ7 156 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 INSIG2Q9Y5U4 225 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 KPTNQ9Y664 436 aa14.33□□□□□ -0.11
PHGDH-230ENST00000641927 ABCA2Q9BZC7 2435 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 TRAV20A0A0B4J274 112 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 DIRAS3O95661 229 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 TGFAP01135 160 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 GZMKP49863 264 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 TMEM30BQ3MIR4 351 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 C11orf42Q8N5U0 333 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 Q8N7P7 452 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 PRRT1Q99946 306 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 METTL8Q9H825 291 aaKnown RBP14.33□□□□□ -0.12
PHGDH-230ENST00000641927 RBM7Q9Y580 266 aaKnown RBP14.33□□□□□ -0.12
PHGDH-230ENST00000641927 SESN1Q9Y6P5 492 aa14.33□□□□□ -0.12
PHGDH-230ENST00000641927 CR1P17927 2039 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 RGS11O94810 467 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 TOX4O94842 621 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 RBP4P02753 201 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 ZNF735P0CB33 412 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 GNG10P50151 68 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 CCR6P51684 374 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 FXYD4P59646 89 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 HERV-K104P61576 105 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 MORN2Q502X0 79 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 UTF1Q5T230 341 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 FAHD2BQ6P2I3 314 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-230ENST00000641927 IDO2Q6ZQW0 420 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 GLCCI1Q86VQ1 547 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 H1FOOQ8IZA3 346 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-230ENST00000641927 OR52M1Q8NGK5 317 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 FAHD2AQ96GK7 314 aa14.32□□□□□ -0.12
PHGDH-230ENST00000641927 PPYP01298 95 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 AADACP22760 399 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 COX7A1P24310 79 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 DHRS11Q6UWP2 260 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 VMO1Q7Z5L0 202 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 GIMAP1Q8WWP7 306 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 PARP12Q9H0J9 701 aaKnown RBP14.31□□□□□ -0.12
PHGDH-230ENST00000641927 TMEM133Q9H2Q1 129 aa14.31□□□□□ -0.12
PHGDH-230ENST00000641927 FAM240BA0A1B0GVZ2 78 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 A0A1W2PPE3 182 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 YPEL1O60688 119 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 RGS21Q2M5E4 152 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 CYB5R2Q6BCY4 276 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 C1orf122Q6ZSJ8 110 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 OR2AK2Q8NG84 335 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 ENKURQ8TC29 256 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 TOMM40LQ969M1 308 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 YPEL2Q96QA6 119 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 SIRPDQ9H106 197 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 OR2W1Q9Y3N9 320 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 ITPR3Q14573 2671 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 ZNF16P17020 682 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-230ENST00000641927 PRTN3P24158 256 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 PAX8Q06710 450 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 ZNF660Q6AZW8 331 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-230ENST00000641927 PDZD9Q8IXQ8 264 aa14.3□□□□□ -0.12
PHGDH-230ENST00000641927 ABHD12Q8N2K0 398 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms