RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 SLC25A32Q9H2D1 315 aa8.6□□□□□ -1.03
PHGDH-224ENST00000641711 HES4Q9HCC6 221 aa8.6□□□□□ -1.03
PHGDH-224ENST00000641711 TMEM100Q9NV29 134 aa8.6□□□□□ -1.03
PHGDH-224ENST00000641711 RASL12Q9NYN1 266 aa8.6□□□□□ -1.03
PHGDH-224ENST00000641711 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
PHGDH-224ENST00000641711 FLNAP21333 2647 aaKnown RBP8.59□□□□□ -1.03
PHGDH-224ENST00000641711 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 HOXB5P09067 269 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 SCTP09683 121 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 OR5AC1P0C628 307 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 TNFRSF1AP19438 455 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 DUSP1P28562 367 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 FXYD4P59646 89 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 SRPXP78539 464 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 HERPUD1Q15011 391 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 OR8G1Q15617 311 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 ALKBH6Q3KRA9 238 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 IGSF11Q5DX21 431 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 SPIN3Q5JUX0 258 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 GGNBP1Q5YKI7 109 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 SPNS3Q6ZMD2 512 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 LGI3Q8N145 548 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 OR4A4PQ8NGN8 299 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 ANGPTL6Q8NI99 470 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 DCUN1D4Q92564 292 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 ERGIC1Q969X5 290 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 MSI2Q96DH6 328 aaKnown RBP8.59□□□□□ -1.03
PHGDH-224ENST00000641711 ZFP57Q9NU63 452 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 FZR1Q9UM11 496 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 PCDHB10Q9UN67 800 aa8.59□□□□□ -1.03
PHGDH-224ENST00000641711 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 ZSCAN5BA6NJL1 495 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 GPR31O00270 319 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 SLC33A1O00400 549 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 MPPED1O15442 326 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 MLNRO43193 412 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 PTBP3O95758 552 aaKnown RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 IGHV4-39P01824 125 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 RLN2P04090 185 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 WNT2P09544 360 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 LMO1P25800 156 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 GNRHRP30968 328 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 NUP62P37198 522 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 CD200P41217 278 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 GATA4P43694 442 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 PDLIM4P50479 330 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 HLA-DRB3P79483 266 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 RAB32Q13637 225 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 ATXN7L3Q14CW9 347 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 IAH1Q2TAA2 248 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 Q5PR19 223 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 FIP1L1Q6UN15 594 aaKnown RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 CLEC2AQ6UVW9 174 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 C11orf53Q8IXP5 236 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 GLYATL2Q8WU03 294 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 RDH5Q92781 318 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 RRNAD1Q96FB5 475 aaKnown RBP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 PERPQ96FX8 193 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 SHARPINQ9H0F6 387 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 SAP30LQ9HAJ7 183 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 TMED3Q9Y3Q3 217 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 F8P00451 2351 aa8.58□□□□□ -1.04
PHGDH-224ENST00000641711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.04
PHGDH-224ENST00000641711 DYSFO75923 2080 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 PIGBOS1A0A0B4J2F0 54 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 A0A1B0GW55 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 hCG_1807616A0A1W2PRN6 198 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 CDIPTO14735 213 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 SH2D1BO14796 132 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 ZNF205O95201 554 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 SPDEFO95238 335 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 OR2H2O95918 312 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 IGHV1-46P01743 117 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L2P0CJ85 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L3P0CJ86 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L4P0CJ87 422 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L5P0CJ88 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L6P0CJ89 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 DUX4L7P0CJ90 424 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 ZNF44P15621 663 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 SLC25A16P16260 332 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 LUMP51884 338 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 P2RX3P56373 397 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 TNFAIP6P98066 277 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 AANATQ16613 207 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 PAN3Q58A45 887 aaKnown RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 ZNF497Q6ZNH5 498 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 Q6ZR03 302 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 PDZD9Q8IXQ8 264 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 H1FOOQ8IZA3 346 aaPredicted RBP8.57□□□□□ -1.04
PHGDH-224ENST00000641711 ZNF565Q8N9K5 539 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 OR5T2Q8NGG2 359 aa8.57□□□□□ -1.04
PHGDH-224ENST00000641711 OR1S1Q8NH92 325 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms