RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CACFD1Q9UGQ2 172 aa14.38□□□□□ -0.11
PHGDH-211ENST00000641213 RNF115Q9Y4L5 304 aa14.38□□□□□ -0.11
PHGDH-211ENST00000641213 PIGBOS1A0A0B4J2F0 54 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 A6NLC8 198 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 CHST1O43916 411 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 IGKV1-39P01597 117 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 IGKV1D-39P04432 117 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 SLC25A6P12236 298 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 EPHA1P21709 976 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 GCH1P30793 250 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 CLINT1Q14677 625 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 MBNL2Q5VZF2 373 aaKnown RBP14.37□□□□□ -0.11
PHGDH-211ENST00000641213 LUZP4Q9P127 313 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 RBM7Q9Y580 266 aaKnown RBP14.37□□□□□ -0.11
PHGDH-211ENST00000641213 A0A1B0GU03 582 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 TMEM30CPA0ZSE6 113 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 F12P00748 615 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-211ENST00000641213 FHITP49789 147 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 BEND4Q6ZU67 534 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 UFSP2Q9NUQ7 469 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 KCNS2Q9ULS6 477 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 SLC25A15Q9Y619 301 aa14.37□□□□□ -0.11
PHGDH-211ENST00000641213 DIDO1Q9BTC0 2240 aaKnown RBP14.37□□□□□ -0.11
PHGDH-211ENST00000641213 CACNA1DQ01668 2161 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 TM4SF5O14894 197 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 TSPAN15O95858 294 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 SFTA3P0C7M3 94 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 CD80P33681 288 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 CAMLGP49069 296 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 RAB5CP51148 216 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 DVL1P1P54792 670 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-211ENST00000641213 PAX9P55771 341 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 ZNF616Q08AN1 781 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 ZNF266Q14584 549 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 MIDNQ504T8 468 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 TMEM171Q8WVE6 324 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 KCNIP1Q9NZI2 227 aa14.36□□□□□ -0.11
PHGDH-211ENST00000641213 C9JQL5 133 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 TRIM77I1YAP6 450 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 WRBO00258 174 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 C1QL1O75973 258 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 EIF2S3P41091 472 aaKnown RBP14.35□□□□□ -0.11
PHGDH-211ENST00000641213 IZUMO4Q1ZYL8 232 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 SLC35E4Q6ICL7 350 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 Q6ZRM9 215 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 Q6ZS92 163 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 FAM169BQ8N8A8 192 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 OR5C1Q8NGR4 320 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 OR1L1Q8NH94 360 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 PRR7Q8TB68 274 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 C19orf12Q9NSK7 152 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 STRAPQ9Y3F4 350 aaKnown RBP14.35□□□□□ -0.11
PHGDH-211ENST00000641213 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 KIAA1324LA8MWY0 1029 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-211ENST00000641213 FAM157AC9JC47 383 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 CST7O76096 145 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 PTBP3O95758 552 aaKnown RBP14.35□□□□□ -0.11
PHGDH-211ENST00000641213 TFF1P04155 84 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 SNCAP37840 140 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 OR3A1P47881 315 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 DYNLT3P51808 116 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 AESQ08117 197 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 ZNF585BQ52M93 769 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 C1orf174Q8IYL3 243 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 DRAM1Q8N682 238 aa14.35□□□□□ -0.11
PHGDH-211ENST00000641213 LSM10Q969L4 123 aaKnown RBP14.35□□□□□ -0.11
PHGDH-211ENST00000641213 C12orf77C9JDV5 145 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 SNAPINO95295 136 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 PRH1P02810 166 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 ZNF16P17020 682 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-211ENST00000641213 BAXQ07812 192 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 TMEM182Q6ZP80 229 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-211ENST00000641213 RNASE11Q8TAA1 199 aaKnown RBP14.34□□□□□ -0.11
PHGDH-211ENST00000641213 GALMQ96C23 342 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 COQ2Q96H96 371 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
PHGDH-211ENST00000641213 FAM215AQ9Y5M1 114 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 RFNGQ9Y644 331 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 AKAP13Q12802 2813 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 OOEPA6NGQ2 149 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 IGKV1-5P01602 117 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 ATP6V0CP27449 155 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 NPBWR1P48145 328 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 ZNF295-AS1Q8N0V1 137 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 COMMD1Q8N668 190 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 METRNQ9UJH8 293 aa14.34□□□□□ -0.11
PHGDH-211ENST00000641213 SMUG1Q53HV7 270 aa14.33□□□□□ -0.12
PHGDH-211ENST00000641213 ZNF474Q6S9Z5 364 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-211ENST00000641213 TMEM217Q8N7C4 229 aa14.33□□□□□ -0.12
PHGDH-211ENST00000641213 SCRT1Q9BWW7 348 aa14.33□□□□□ -0.12
PHGDH-211ENST00000641213 CACNG5Q9UF02 275 aa14.33□□□□□ -0.12
PHGDH-211ENST00000641213 RIF1Q5UIP0 2472 aaKnown RBP14.32□□□□□ -0.12
PHGDH-211ENST00000641213 K7EM74 188 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 K7N7A8 449 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 HBZP02008 142 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 CD200P41217 278 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 COL10A1Q03692 680 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
PHGDH-211ENST00000641213 SMIM21Q3B7S5 101 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms