RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 CACNG5Q9UF02 275 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 C3orf80F5H4A9 247 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 TNFSF11O14788 317 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 CNOT4O95628 575 aaKnown RBP17.48■□□□□ 0.39
PMS1-222ENST00000639501 IGKV1-39P01597 117 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 IGKV1D-39P04432 117 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 LRRC75BQ2VPJ9 315 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 Q6ZS49 121 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 GPR137CQ8N3F9 429 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 RPP25LQ8N5L8 163 aaKnown RBP17.48■□□□□ 0.39
PMS1-222ENST00000639501 RAB40CQ96S21 281 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 PARLQ9H300 379 aa17.48■□□□□ 0.39
PMS1-222ENST00000639501 EDN3P14138 238 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 PSG4Q00888 419 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 CENPVQ7Z7K6 275 aaPredicted RBP17.47■□□□□ 0.39
PMS1-222ENST00000639501 LHX4Q969G2 390 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 IL22RA2Q969J5 263 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 POLR3KQ9Y2Y1 108 aaPredicted RBP17.47■□□□□ 0.39
PMS1-222ENST00000639501 A0A1W2PR80 420 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 HRASP01112 189 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 SPINK2P20155 84 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 FAM3BP58499 235 aaPredicted RBP17.47■□□□□ 0.39
PMS1-222ENST00000639501 TESK1Q15569 626 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 C20orf204Q6ZNR8 217 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 TMEM18Q96B42 140 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 OR5B12Q96R08 314 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 PSENENQ9NZ42 101 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 SEMA5BQ9P283 1151 aa17.47■□□□□ 0.39
PMS1-222ENST00000639501 TDGF1P3P51864 188 aa17.46■□□□□ 0.39
PMS1-222ENST00000639501 PCSK4Q6UW60 755 aa17.46■□□□□ 0.39
PMS1-222ENST00000639501 LRP11Q86VZ4 500 aa17.46■□□□□ 0.39
PMS1-222ENST00000639501 OR4C12Q96R67 309 aa17.46■□□□□ 0.39
PMS1-222ENST00000639501 FREM2Q5SZK8 3169 aa17.46■□□□□ 0.39
PMS1-222ENST00000639501 A0A0J9YW62 118 aa17.46■□□□□ 0.38
PMS1-222ENST00000639501 UBE2L5PA0A1B0GUS4 154 aa17.46■□□□□ 0.38
PMS1-222ENST00000639501 ZNF25P17030 456 aaPredicted RBP17.46■□□□□ 0.38
PMS1-222ENST00000639501 HNRNPKP61978 463 aaKnown RBP eCLIP17.46■□□□□ 0.38
PMS1-222ENST00000639501 KRTAP27-1Q3LI81 207 aa17.46■□□□□ 0.38
PMS1-222ENST00000639501 WDR61Q9GZS3 305 aaKnown RBP17.46■□□□□ 0.38
PMS1-222ENST00000639501 SLC25A22Q9H936 323 aa17.46■□□□□ 0.38
PMS1-222ENST00000639501 TMEM38BQ9NVV0 291 aa17.46■□□□□ 0.38
PMS1-222ENST00000639501 MRPS17Q9Y2R5 130 aaKnown RBP17.46■□□□□ 0.38
PMS1-222ENST00000639501 ZNF816-ZNF321PA0A0X1KG74 233 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 SYNGR2O43760 224 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 IFNA1P01562 189 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 CD27P26842 260 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 IQCJQ1A5X6 159 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 GBGT1Q8N5D6 347 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 MRPL30Q8TCC3 161 aaKnown RBP17.45■□□□□ 0.38
PMS1-222ENST00000639501 NEK7Q8TDX7 302 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 WNT5BQ9H1J7 359 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 NCOR1O75376 2440 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 SYT13Q7L8C5 426 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 REPIN1Q9BWE0 567 aaKnown RBP17.45■□□□□ 0.38
PMS1-222ENST00000639501 RNF150Q9ULK6 438 aa17.45■□□□□ 0.38
PMS1-222ENST00000639501 SERPINE2P07093 398 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 CST2P09228 141 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 ERVFC1-1P60608 527 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 SERF2P84101 59 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 BTNL3Q6UXE8 466 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 CARFQ8N187 725 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 DEFB126Q9BYW3 111 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 OR51I2Q9H344 312 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 AKIRIN1Q9H9L7 192 aaPredicted RBP17.44■□□□□ 0.38
PMS1-222ENST00000639501 DMDP11532 3685 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 A6NNC1 897 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 M0R143 59 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 PIAS2O75928 621 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 HOXA6P31267 233 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 WNT5AP41221 380 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 ACSM6Q6P461 480 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.44■□□□□ 0.38
PMS1-222ENST00000639501 SLC39A9Q9NUM3 307 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 OR6C3Q9NZP0 311 aa17.44■□□□□ 0.38
PMS1-222ENST00000639501 KIR2DL5BA0A0G2JN68 375 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 KIR2DL5BA0A0G2JPC4 375 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 NUPR1O60356 82 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 ZIC3O60481 467 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 VAMP5O95183 116 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 SCGB1D1O95968 90 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 IGKV1-5P01602 117 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 CCL3P10147 92 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 ACSF3Q4G176 576 aaPredicted RBP17.43■□□□□ 0.38
PMS1-222ENST00000639501 KIR2DL5AQ8N109 375 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 OR5T1Q8NG75 326 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 ATP23Q9Y6H3 246 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 DIDO1Q9BTC0 2240 aaKnown RBP17.43■□□□□ 0.38
PMS1-222ENST00000639501 GGCTO75223 188 aaKnown RBP17.43■□□□□ 0.38
PMS1-222ENST00000639501 RAB4AP20338 218 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 SPANXN5Q5MJ07 72 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 TMEM256Q8N2U0 113 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 OR10V1Q8NGI7 309 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 OR2T10Q8NGZ9 312 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 TAF15Q92804 592 aaKnown RBP eCLIP17.43■□□□□ 0.38
PMS1-222ENST00000639501 OR6C1Q96RD1 312 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 OR2H1Q9GZK4 316 aa17.43■□□□□ 0.38
PMS1-222ENST00000639501 ZDHHC23Q8IYP9 409 aa17.42■□□□□ 0.38
PMS1-222ENST00000639501 TSTD1Q8NFU3 115 aa17.42■□□□□ 0.38
PMS1-222ENST00000639501 FKBP11Q9NYL4 201 aa17.42■□□□□ 0.38
PMS1-222ENST00000639501 FRYLO94915 3013 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms