RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 GFOD1Q9NXC2 390 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 LRFN1Q9P244 771 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 SYNGR2O43760 224 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 SYNGR4O95473 234 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 FOXG1P55316 489 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 CLDN18P56856 261 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 NKX6-1P78426 367 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZNF787Q6DD87 383 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZNF488Q96MN9 340 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 FAM173AQ9BQD7 235 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZNF703Q9H7S9 590 aaPredicted RBP17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 TMEM242Q9NWH2 141 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 DLL3Q9NYJ7 618 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 CACNG5Q9UF02 275 aa17.11■□□□□ 0.33
SYNGAP1-227ENST00000638142 CER1O95813 267 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 TRGC2P03986 189 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 RAB11AP62491 216 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 PLP2Q04941 152 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 SPINK14Q6IE38 97 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 Q6ZRM9 215 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 CT55Q8WUE5 264 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 RSG1Q9BU20 258 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 PKIBQ9C010 78 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 B4GALT7Q9UBV7 327 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 TGOLN2O43493 480 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 SOD3P08294 240 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 PEAR1Q5VY43 1037 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 OR2M7Q8NG81 312 aa17.1■□□□□ 0.33
SYNGAP1-227ENST00000638142 PATE3B3GLJ2 98 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 IGKV1-39P01597 117 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 IGKV1D-39P04432 117 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 SERF2P84101 59 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 C6orf15Q6UXA7 325 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZNF525Q8N782 197 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 APH1AQ96BI3 265 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 P2RX4Q99571 388 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 PTBP3O95758 552 aaKnown RBP17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 RND2P52198 227 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 HBG1P69891 147 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 HBG2P69892 147 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 MOB1BQ7L9L4 216 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 MAFAQ8NHW3 353 aaPredicted RBP17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 GPR61Q9BZJ8 451 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 PSENENQ9NZ42 101 aa17.09■□□□□ 0.33
SYNGAP1-227ENST00000638142 FREM1Q5H8C1 2179 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZFP92A6NM28 416 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 MDH2P40926 338 aaKnown RBP17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 IZUMO4Q1ZYL8 232 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 GFI1BQ5VTD9 330 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 C1orf87Q8N0U7 546 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 IL1F10Q8WWZ1 152 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 FAM210BQ96KR6 192 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 ZNF665Q9H7R5 613 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 OR1A1Q9P1Q5 309 aa17.08■□□□□ 0.33
SYNGAP1-227ENST00000638142 CYB5R3P00387 301 aaPredicted RBP17.08■□□□□ 0.32
SYNGAP1-227ENST00000638142 IGLV2-14P01704 120 aa17.08■□□□□ 0.32
SYNGAP1-227ENST00000638142 OR2T2Q6IF00 324 aa17.08■□□□□ 0.32
SYNGAP1-227ENST00000638142 C17orf78Q8N4C9 275 aa17.08■□□□□ 0.32
SYNGAP1-227ENST00000638142 OR5H1A6NKK0 313 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 CLDN34H7C241 214 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 ATXN7O15265 892 aaPredicted RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 CELA3AP09093 270 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 METTL15P1P0C7V9 234 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 ZNF726P1Q15940 193 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 LRRC75BQ2VPJ9 315 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 PARD6GQ9BYG4 376 aaPredicted RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 LIN7CQ9NUP9 197 aaKnown RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 NEURL1O76050 574 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 IGKV1-5P01602 117 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 IAPPP10997 89 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 TESK1Q15569 626 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 LCN15Q6UWW0 184 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 TIPARPQ7Z3E1 657 aaKnown RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 ABHD5Q8WTS1 349 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 CA5BP1Q8WTZ4 195 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 RCC1LQ96I51 464 aaKnown RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 THOC3Q96J01 351 aaKnown RBP17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 OR51I2Q9H344 312 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 VSIRQ9H7M9 311 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 OR14J1Q9UGF5 321 aa17.07■□□□□ 0.32
SYNGAP1-227ENST00000638142 PCSK5Q92824 1860 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 J3QT63 122 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 LILRA1O75019 489 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 TRGC1P0CF51 173 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 ARL16Q0P5N6 197 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 FRZBQ92765 325 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 PINX1Q96BK5 328 aaKnown RBP17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 APLNRP35414 380 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 SSTP61278 116 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 Q6P435 159 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 MRGPRGQ86SM5 289 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 LILRB2Q8N423 598 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 C14orf144Q96I85 54 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 SDF2L1Q9HCN8 221 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 VAX2Q9UIW0 290 aa17.06■□□□□ 0.32
SYNGAP1-227ENST00000638142 TMEM265A0A087WTH1 108 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 LY86O95711 162 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 WNT5AP41221 380 aa17.05■□□□□ 0.32
SYNGAP1-227ENST00000638142 TMEM41BQ5BJD5 291 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms