RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 EAF1Q96JC9 268 aaPredicted RBP14.04□□□□□ -0.16
PNKP-230ENST00000638016 FAAP24Q9BTP7 215 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 CST11Q9H112 138 aa14.04□□□□□ -0.16
PNKP-230ENST00000638016 MBNL3Q9NUK0 354 aaKnown RBP14.04□□□□□ -0.16
PNKP-230ENST00000638016 TCRBV4S1A1TA0A5B7 111 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 SLC22A1O15245 554 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 SPINT2O43291 252 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 RPS27AP62979 156 aaKnown RBP14.03□□□□□ -0.16
PNKP-230ENST00000638016 QRFPP83859 136 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 EMX1Q04741 257 aaPredicted RBP14.03□□□□□ -0.16
PNKP-230ENST00000638016 TPBGQ13641 420 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 KHDC1LQ5JSQ8 128 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 C6orf183Q5T699 404 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 SLC25A48Q6ZT89 311 aaKnown RBP14.03□□□□□ -0.16
PNKP-230ENST00000638016 TMEM59Q9BXS4 323 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 GHRLQ9UBU3 117 aa14.03□□□□□ -0.16
PNKP-230ENST00000638016 AK6Q9Y3D8 172 aaKnown RBP14.03□□□□□ -0.16
PNKP-230ENST00000638016 TMEM14DPA8MWL7 114 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 M0QZK8 103 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 PPP1CCP36873 323 aaKnown RBP14.02□□□□□ -0.17
PNKP-230ENST00000638016 CLDN12P56749 244 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 FABP5Q01469 135 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 EBI3Q14213 229 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 C18orf65Q6ZTR6 163 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 IZUMO1Q8IYV9 350 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 Q8N6K4 173 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 C8orf31Q8N9H6 132 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 OR4F17Q8NGA8 305 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 OR4F4Q96R69 305 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 OR2S2Q9NQN1 319 aa14.02□□□□□ -0.17
PNKP-230ENST00000638016 PSMB11A5LHX3 300 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 UBBP0CG47 229 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 CD37P11049 281 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 CPEP16870 476 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 MLLT11Q13015 90 aaPredicted RBP14.01□□□□□ -0.17
PNKP-230ENST00000638016 PLA2G7Q13093 441 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 PRSS48Q7RTY5 328 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 Q8N9W7 124 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 NEDD4LQ96PU5 975 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 HDHD3Q9BSH5 251 aaPredicted RBP14.01□□□□□ -0.17
PNKP-230ENST00000638016 TM2D1Q9BX74 207 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 DNAH3Q8TD57 4116 aa14.01□□□□□ -0.17
PNKP-230ENST00000638016 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
PNKP-230ENST00000638016 SOCS1O15524 211 aa14□□□□□ -0.17
PNKP-230ENST00000638016 FGF16O43320 207 aa14□□□□□ -0.17
PNKP-230ENST00000638016 CA11O75493 328 aa14□□□□□ -0.17
PNKP-230ENST00000638016 GLAP06280 429 aa14□□□□□ -0.17
PNKP-230ENST00000638016 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
PNKP-230ENST00000638016 ZNF137PP52743 207 aa14□□□□□ -0.17
PNKP-230ENST00000638016 SSX1Q16384 188 aa14□□□□□ -0.17
PNKP-230ENST00000638016 MORN2Q502X0 79 aa14□□□□□ -0.17
PNKP-230ENST00000638016 KPRPQ5T749 579 aaPredicted RBP14□□□□□ -0.17
PNKP-230ENST00000638016 TGIF2LXQ8IUE1 241 aa14□□□□□ -0.17
PNKP-230ENST00000638016 ODF3L1Q8IXM7 274 aa14□□□□□ -0.17
PNKP-230ENST00000638016 OR6M1Q8NGM8 313 aa14□□□□□ -0.17
PNKP-230ENST00000638016 MGLLQ99685 303 aa14□□□□□ -0.17
PNKP-230ENST00000638016 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
PNKP-230ENST00000638016 PLSCR3Q9NRY6 295 aa14□□□□□ -0.17
PNKP-230ENST00000638016 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
PNKP-230ENST00000638016 SHISA3A0PJX4 238 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 SERPINE3A8MV23 424 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 PF4V1P10720 104 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 IGLL1P15814 213 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 IL3RAP26951 378 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
PNKP-230ENST00000638016 F2RL1P55085 397 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 HMGN3Q15651 99 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 Q3ZCU0 254 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 TRAT1Q6PIZ9 186 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 SVOPQ8N4V2 548 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 OR2T10Q8NGZ9 312 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 KCNG3Q8TAE7 436 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 PLGRKTQ9HBL7 147 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 KCNIP1Q9NZI2 227 aa13.99□□□□□ -0.17
PNKP-230ENST00000638016 SLC17A2O00624 439 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 BPNT1O95861 308 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 OR3A3P47888 321 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 LCNL1Q6ZST4 164 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 SLC35E3Q7Z769 313 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 OR51D1Q8NGF3 324 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 SETD6Q8TBK2 473 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 IL1F10Q8WWZ1 152 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 PHF21AQ96BD5 680 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 RITA1Q96K30 269 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 HSPB9Q9BQS6 159 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
PNKP-230ENST00000638016 VCX3BQ9H321 246 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 ISYNA1Q9NPH2 558 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 AK3Q9UIJ7 227 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 JPT1Q9UK76 154 aa13.98□□□□□ -0.17
PNKP-230ENST00000638016 FOXI3A8MTJ6 420 aaPredicted RBP13.97□□□□□ -0.17
PNKP-230ENST00000638016 ATP6V1G2O95670 118 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 NAPSAO96009 420 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 MOSP00540 346 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 IGHG2P01859 326 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 CD1BP29016 333 aa13.97□□□□□ -0.17
PNKP-230ENST00000638016 GPR12P47775 334 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms