RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 GNG3P63215 75 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 SERF2P84101 59 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 SSPNQ14714 243 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST2H2BEQ16778 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.37□□□□□ -0.43
CLN6-215ENST00000636674 ZNF525Q8N782 197 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 OR10V1Q8NGI7 309 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BHQ93079 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BNQ99877 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 HIST1H2BMQ99879 126 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 GAR1Q9NY12 217 aaKnown RBP12.37□□□□□ -0.43
CLN6-215ENST00000636674 TREM2Q9NZC2 230 aa12.37□□□□□ -0.43
CLN6-215ENST00000636674 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
CLN6-215ENST00000636674 A0A096LPE4 126 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 SYNGR2O43760 224 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 IGKV1-39P01597 117 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 IGLV2-14P01704 120 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 IGKV1D-39P04432 117 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 CCL2P13500 99 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 S100A2P29034 98 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
CLN6-215ENST00000636674 TMEM267Q0VDI3 215 aaPredicted RBP12.36□□□□□ -0.43
CLN6-215ENST00000636674 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 DNLZQ5SXM8 178 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 ZNF787Q6DD87 383 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 SLC25A24Q6NUK1 477 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 FAM58AQ8N1B3 248 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 DLL3Q9NYJ7 618 aa12.36□□□□□ -0.43
CLN6-215ENST00000636674 FREM1Q5H8C1 2179 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 TGIF2-C20orf24A0A0A6YYL0 155 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 ANKRD30BLA7E2S9 258 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 CER1O95813 267 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 CYB5R3P00387 301 aaPredicted RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 NDUFA6P56556 154 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 Q6ZRM9 215 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 OR51H1Q8NH63 302 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 SCGB1C1Q8TD33 95 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 FAM173AQ9BQD7 235 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 GNG13Q9P2W3 67 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 ERRFI1Q9UJM3 462 aaPredicted RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 ZNF292O60281 2723 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 ZNF729A6NN14 1252 aaPredicted RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 H3BP45 60 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 NGFP01138 241 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 APLNRP35414 380 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 HBG1P69891 147 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 HBG2P69892 147 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 DCAF12Q5T6F0 453 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 OR2M7Q8NG81 312 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 CA5BP1Q8WTZ4 195 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 CT55Q8WUE5 264 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 STRADBQ9C0K7 418 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 LIN7CQ9NUP9 197 aaKnown RBP12.35□□□□□ -0.43
CLN6-215ENST00000636674 LRFN1Q9P244 771 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 B4GALT7Q9UBV7 327 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 CACNG5Q9UF02 275 aa12.35□□□□□ -0.43
CLN6-215ENST00000636674 CYB5BO43169 146 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 SYNGR4O95473 234 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 RAB11AP62491 216 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 TESK1Q15569 626 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 Q6P435 159 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 P4HA3Q7Z4N8 544 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 RDH5Q92781 318 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
CLN6-215ENST00000636674 RCC1LQ96I51 464 aaKnown RBP12.34□□□□□ -0.43
CLN6-215ENST00000636674 LOXL4Q96JB6 756 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 OR14J1Q9UGF5 321 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
CLN6-215ENST00000636674 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 FAM90A26D6RGX4 464 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 CLDN34H7C241 214 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 J3QT63 122 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 PLP2Q04941 152 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 MRGPRGQ86SM5 289 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 LINC00469Q8N7U9 141 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 RNASE11Q8TAA1 199 aaKnown RBP12.33□□□□□ -0.43
CLN6-215ENST00000636674 APH1AQ96BI3 265 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 ZNF488Q96MN9 340 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 OR51I2Q9H344 312 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 PSENENQ9NZ42 101 aa12.33□□□□□ -0.43
CLN6-215ENST00000636674 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms