RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 RAB40CQ96S21 281 aa15.56■□□□□ 0.08
CACNA1A-227ENST00000636549 LOC105371242A0A075B767 164 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 SAA1P0DJI8 122 aaPredicted RBP15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 EVX1P49640 407 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 HIST1H1AQ02539 215 aaPredicted RBP15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 OR2C3Q8N628 320 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 VSTM2AQ8TAG5 236 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 C2orf83Q53S99 150 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 ZNF385AQ96PM9 386 aaKnown RBP15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 ZNF275Q9NSD4 429 aaPredicted RBP15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 CEACAM18A8MTB9 384 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 CTAG2O75638 210 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 MRGPRGQ86SM5 289 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 PDLIM4P50479 330 aa15.55■□□□□ 0.08
CACNA1A-227ENST00000636549 CARFQ8N187 725 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 C7orf71A4D174 169 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 SNURFLB1AK76 121 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 C1QBP02746 253 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 PCMT1P22061 227 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 Q71RC1 249 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 BEND2Q8NDZ0 799 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 PIPOXQ9P0Z9 390 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 OR2A4O95047 310 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 C1orf162Q8NEQ5 155 aaPredicted RBP15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 OR2A7Q96R45 310 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 K7N7A8 449 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 SPINT1O43278 529 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 ISG15P05161 165 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 BTG1P62324 171 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 NKX2-6A6NCS4 301 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 AMY1AP04745 511 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 STARD6P59095 220 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 LHFPL5Q8TAF8 219 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 DUX3Q96PT4 197 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 SIGLEC7Q9Y286 467 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 ZFPL1O95159 310 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 RNF122Q9H9V4 155 aa15.54■□□□□ 0.08
CACNA1A-227ENST00000636549 PPIAL4CA0A0B4J2A2 164 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 PPIAL4GP0DN37 164 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 RAC3P60763 192 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 OR2W3Q7Z3T1 314 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 PNKDQ8N490 385 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM56-RWDD3S4R434 201 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 PCM1Q15154 2024 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 DIRC3C9JPN6 131 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 IGHV3-11P01762 117 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 GAB4Q2WGN9 574 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 NPIPB6E9PJ23 425 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 EDIL3O43854 480 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 TDGF1P13385 188 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 FXYD3Q14802 87 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 CALHM1Q8IU99 346 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 OR10G8Q8NGN5 311 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 ATG101Q9BSB4 218 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 A0A1B0GUL6 1792 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 WNT9BO14905 357 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 HIST1H1BP16401 226 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 LGALS3P17931 250 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 SYS1Q8N2H4 156 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 LINC00615Q96LM1 132 aaPredicted RBP15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 RCC2Q9P258 522 aaKnown RBP15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 SLC25A17O43808 307 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 MMP9P14780 707 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 CDKN1AP38936 164 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 ELOBQ15370 118 aa15.53■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM218A2RU14 115 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 CA2P00918 260 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM33P57088 247 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 MESTQ5EB52 335 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 RFLNBQ8N5W9 214 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 DHRS2Q13268 280 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 C17orf47Q8NEP4 570 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 GPR82Q96P67 336 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 TMEM167BQ9NRX6 74 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 FRRS1LQ9P0K9 344 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 UPK3AO75631 287 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 LHX2P50458 406 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 MBNL2Q5VZF2 373 aaKnown RBP15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 CCDC144NLQ6NUI1 221 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 LYZL2Q7Z4W2 148 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 OR1L8Q8NGR8 309 aa15.52■□□□□ 0.08
CACNA1A-227ENST00000636549 CDCP2Q5VXM1 449 aa15.52■□□□□ 0.07
CACNA1A-227ENST00000636549 TCTEX1D1Q8N7M0 179 aa15.52■□□□□ 0.07
CACNA1A-227ENST00000636549 A0A1B0GUH1 482 aa15.52■□□□□ 0.07
CACNA1A-227ENST00000636549 ISXQ2M1V0 245 aa15.52■□□□□ 0.07
CACNA1A-227ENST00000636549 ACSF3Q4G176 576 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 ABLIM2Q6H8Q1 611 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 GMPPAQ96IJ6 420 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 MALP21145 153 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 PTBP1P26599 531 aaKnown RBP eCLIP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 CKS2P33552 79 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 FAM106AQ4KMX7 169 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 TMEM177Q53S58 311 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 C21orf140B9A014 251 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 DRD3P35462 400 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 DUSP21Q9H596 190 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 FOXI3A8MTJ6 420 aaPredicted RBP15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 PGA3P0DJD8 388 aa15.51■□□□□ 0.07
CACNA1A-227ENST00000636549 FBXW9Q5XUX1 488 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms