RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 LRRC42Q9Y546 428 aa15.03■□□□□ -0
CLN6-213ENST00000636212 NOTCH1P46531 2555 aa15.02■□□□□ -0
CLN6-213ENST00000636212 RGS10O43665 173 aa15.02■□□□□ -0
CLN6-213ENST00000636212 IGHG2P01859 326 aa15.02■□□□□ -0
CLN6-213ENST00000636212 HSMCR30P0CW71 290 aa15.02■□□□□ -0
CLN6-213ENST00000636212 HTR2CP28335 458 aa15.02■□□□□ -0
CLN6-213ENST00000636212 VHLP40337 213 aa15.02■□□□□ -0
CLN6-213ENST00000636212 RANBP1P43487 201 aa15.02■□□□□ -0
CLN6-213ENST00000636212 HSPA13P48723 471 aa15.02■□□□□ -0
CLN6-213ENST00000636212 INSL4Q14641 139 aa15.02■□□□□ -0
CLN6-213ENST00000636212 TRAM1Q15629 374 aa15.02■□□□□ -0
CLN6-213ENST00000636212 C1orf100Q5SVJ3 147 aa15.02■□□□□ -0
CLN6-213ENST00000636212 FAM27D1Q5T7N8 215 aa15.02■□□□□ -0
CLN6-213ENST00000636212 C10orf99Q6UWK7 81 aa15.02■□□□□ -0
CLN6-213ENST00000636212 ZNF329Q86UD4 541 aa15.02■□□□□ -0
CLN6-213ENST00000636212 ST6GALNAC6Q969X2 333 aa15.02■□□□□ -0
CLN6-213ENST00000636212 CCDC90BQ9GZT6 254 aa15.02■□□□□ -0
CLN6-213ENST00000636212 MBNL3Q9NUK0 354 aaKnown RBP15.02■□□□□ -0
CLN6-213ENST00000636212 JPT1Q9UK76 154 aa15.02■□□□□ -0
CLN6-213ENST00000636212 LSM2Q9Y333 95 aaKnown RBP15.02■□□□□ -0
CLN6-213ENST00000636212 SLC31A2O15432 143 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 DUS4LO95620 317 aaKnown RBP15.01□□□□□ -0.01
CLN6-213ENST00000636212 VSIG8P0DPA2 414 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 ZNF137PP52743 207 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 RPS27AP62979 156 aaKnown RBP15.01□□□□□ -0.01
CLN6-213ENST00000636212 CT45A1Q5HYN5 189 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 LIPKQ5VXJ0 399 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 SIGIRRQ6IA17 410 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 LRRTM1Q86UE6 522 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 ZNF439Q8NDP4 499 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 WFDC9Q8NEX5 89 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 CT45A3Q8NHU0 189 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 PHF21AQ96BD5 680 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 GALMQ96C23 342 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 RCC1LQ96I51 464 aaKnown RBP15.01□□□□□ -0.01
CLN6-213ENST00000636212 NOL4LQ96MY1 436 aaPredicted RBP15.01□□□□□ -0.01
CLN6-213ENST00000636212 CHMP1AQ9HD42 196 aaPredicted RBP15.01□□□□□ -0.01
CLN6-213ENST00000636212 ZFP57Q9NU63 452 aa15.01□□□□□ -0.01
CLN6-213ENST00000636212 NUDT19A8MXV4 375 aa15□□□□□ -0.01
CLN6-213ENST00000636212 AP4M1O00189 453 aa15□□□□□ -0.01
CLN6-213ENST00000636212 RRP9O43818 475 aaKnown RBP15□□□□□ -0.01
CLN6-213ENST00000636212 ARL6IP5O75915 188 aa15□□□□□ -0.01
CLN6-213ENST00000636212 BPNT1O95861 308 aa15□□□□□ -0.01
CLN6-213ENST00000636212 UCHL1P09936 223 aa15□□□□□ -0.01
CLN6-213ENST00000636212 IGLL1P15814 213 aa15□□□□□ -0.01
CLN6-213ENST00000636212 MYF6P23409 242 aa15□□□□□ -0.01
CLN6-213ENST00000636212 PSMA1P25786 263 aaKnown RBP15□□□□□ -0.01
CLN6-213ENST00000636212 SLC6A1P30531 599 aa15□□□□□ -0.01
CLN6-213ENST00000636212 HTD2P86397 168 aa15□□□□□ -0.01
CLN6-213ENST00000636212 MORN2Q502X0 79 aa15□□□□□ -0.01
CLN6-213ENST00000636212 FAM53AQ6NSI3 398 aaPredicted RBP15□□□□□ -0.01
CLN6-213ENST00000636212 IZUMO2Q6UXV1 221 aa15□□□□□ -0.01
CLN6-213ENST00000636212 STPG2Q8N412 459 aa15□□□□□ -0.01
CLN6-213ENST00000636212 OR6M1Q8NGM8 313 aa15□□□□□ -0.01
CLN6-213ENST00000636212 MRPL30Q8TCC3 161 aaKnown RBP15□□□□□ -0.01
CLN6-213ENST00000636212 URM1Q9BTM9 101 aaKnown RBP15□□□□□ -0.01
CLN6-213ENST00000636212 ABHD14AQ9BUJ0 271 aa15□□□□□ -0.01
CLN6-213ENST00000636212 ABCG5Q9H222 651 aa15□□□□□ -0.01
CLN6-213ENST00000636212 PLGRKTQ9HBL7 147 aa15□□□□□ -0.01
CLN6-213ENST00000636212 ISYNA1Q9NPH2 558 aa15□□□□□ -0.01
CLN6-213ENST00000636212 CMYA5Q8N3K9 4069 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 LANCL1O43813 399 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 PRB2P02812 416 aaPredicted RBP14.99□□□□□ -0.01
CLN6-213ENST00000636212 CHATP28329 748 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 ZNF134P52741 427 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 RPL23AP62750 156 aaKnown RBP14.99□□□□□ -0.01
CLN6-213ENST00000636212 IRF3Q14653 427 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 Q8N6K4 173 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 MRAPQ8TCY5 172 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 TMEM203Q969S6 136 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 S1PR3Q99500 378 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 FAAP24Q9BTP7 215 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 ANKRD60Q9BZ19 345 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 GPR61Q9BZJ8 451 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 PLEKHJ1Q9NW61 149 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 STEAP1Q9UHE8 339 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 LINC00527Q9UJ94 153 aa14.99□□□□□ -0.01
CLN6-213ENST00000636212 SLC22A1O15245 554 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 YPEL1O60688 119 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 BLVRBP30043 206 aaPredicted RBP14.98□□□□□ -0.01
CLN6-213ENST00000636212 PPP1CCP36873 323 aaKnown RBP14.98□□□□□ -0.01
CLN6-213ENST00000636212 GPR12P47775 334 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 GP2P55259 537 aaKnown RBP14.98□□□□□ -0.01
CLN6-213ENST00000636212 OR10K2Q6IF99 312 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 TEX38Q6PEX7 206 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 C6orf201Q7Z4U5 140 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 Q8N9W7 124 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 OR2AK2Q8NG84 335 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 OR52L2PQ8NGH6 319 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 SETD6Q8TBK2 473 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 YPEL2Q96QA6 119 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 SULT4A1Q9BR01 284 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 DUSP21Q9H596 190 aa14.98□□□□□ -0.01
CLN6-213ENST00000636212 ARSBP15848 533 aa14.97□□□□□ -0.01
CLN6-213ENST00000636212 SOX6P35712 828 aa14.97□□□□□ -0.01
CLN6-213ENST00000636212 MLLT11Q13015 90 aaPredicted RBP14.97□□□□□ -0.01
CLN6-213ENST00000636212 TPBGQ13641 420 aa14.97□□□□□ -0.01
CLN6-213ENST00000636212 PNLIPRP3Q17RR3 467 aa14.97□□□□□ -0.01
CLN6-213ENST00000636212 FOXB2Q5VYV0 432 aa14.97□□□□□ -0.01
CLN6-213ENST00000636212 MOB1BQ7L9L4 216 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms