RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SLC25A17O43808 307 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 HPXP02790 462 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM255AQ5JRV8 349 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TEX30Q5JUR7 227 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SEZ6L2Q6UXD5 910 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 GPR82Q96P67 336 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 VAX2Q9UIW0 290 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 PDCD11Q14690 1871 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DOCK5Q9H7D0 1870 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RBFOX3A6NFN3 312 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 PYCARD-AS1I3L0S3 204 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 K7ERU9 68 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TRGC1P0CF51 173 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 GCAP28676 217 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SCAND1P57086 179 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CX3CL1P78423 397 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LY6EQ16553 131 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DCAF12L2Q5VW00 463 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF418Q8TF45 676 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 DUSP21Q9H596 190 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 KCNE3Q9Y6H6 103 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ELOA3CA0A087WX78 387 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 A0A1W2PQM1 296 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 AHRRA9YTQ3 701 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 HBZP02008 142 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ISL1P61371 349 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 COL10A1Q03692 680 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 KLF9Q13886 244 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 RHBDD2Q6NTF9 364 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LINC00299Q6ZSB3 139 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 NRG4Q8WWG1 115 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ZCCHC14Q8WYQ9 949 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF768Q9H5H4 540 aaKnown RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 IGHV3-21A0A0B4J1V1 117 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 A0A1B0GTH9 108 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 A8MWL6 223 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 THY1P04216 161 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TDGF1P13385 188 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CTLA4P16410 223 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 PSG6Q00889 435 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 FMODQ06828 376 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 MPV17LQ2QL34 196 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LRRC75AQ8NAA5 344 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 TP53I13Q8NBR0 393 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 FIZ1Q96SL8 496 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 SPOCK3Q9BQ16 436 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF275Q9NSD4 429 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-209ENST00000635750 CYB5R1Q9UHQ9 305 aa4.88□□□□□ -1.63
SCN1A-209ENST00000635750 LOC105371242A0A075B767 164 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 SPAARA0A1B0GVQ0 90 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 HLA-DRB3P79483 266 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 C3AR1Q16581 482 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 FBXW9Q5XUX1 488 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 C19orf48Q6RUI8 117 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR8G5Q8NG78 346 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 VSTM2LQ96N03 204 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 NAA50Q9GZZ1 169 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 INTS1Q8N201 2190 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CXorf51AA0A1B0GTR3 108 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 FAM74A7A6NL05 159 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CA11O75493 328 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 RPL27AP46776 148 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 REG1BP48304 166 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 PRICKLE4Q2TBC4 344 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR4X2Q8NGF9 303 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR10AC1Q8NH08 325 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 ADAMTS17Q8TE56 1095 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 SMIM4Q8WVI0 70 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 TEX37Q96LM6 180 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 IL19Q9UHD0 177 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OPN4Q9UHM6 478 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 TJP1Q07157 1748 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 KBTBD11O94819 623 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 P2RY1P47900 373 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 B4GALNT1Q00973 533 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 WDR38Q5JTN6 314 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 C9orf50Q5SZB4 431 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 OR4C13Q8NGP0 309 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 POM121Q96HA1 1249 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 HTN3P15516 51 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 NXPH1P58417 271 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CTF1Q16619 201 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 BSXQ3C1V8 233 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 LHX8Q68G74 356 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 MRM1Q6IN84 353 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 WDFY1Q8IWB7 410 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 TINAGQ9UJW2 476 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 RNF115Q9Y4L5 304 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 KCNE1BA0A087WTH5 132 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 GEMIN2O14893 280 aaKnown RBP4.87□□□□□ -1.63
SCN1A-209ENST00000635750 CD74P04233 296 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 FABP2P12104 132 aa4.87□□□□□ -1.63
SCN1A-209ENST00000635750 ANOS1P23352 680 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms