RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 AQP2P41181 271 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 EIF1P41567 113 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS27P42677 84 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MAGEA1P43355 309 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CD151P48509 253 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 EVX1P49640 407 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TMED10P49755 219 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RND2P52198 227 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF138P52744 262 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TAS2R46P59540 309 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 STXBP1P61764 594 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RPS15AP62244 130 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 UBA52P62987 128 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 HAMPP81172 84 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SARNPP82979 210 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 HOXC5Q00444 222 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CDK5Q00535 292 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MXD1Q05195 221 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 LOXL1Q08397 574 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF816Q0VGE8 651 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 STX4Q12846 297 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 BNIP2Q12982 314 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 IL24Q13007 206 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CHIT1Q13231 466 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLAMF1Q13291 335 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DGCR6Q14129 220 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 GK3PQ14409 553 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 KIR2DS1Q14954 304 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PDK2Q15119 407 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RBMY1FQ15415 496 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 DEFB136Q30KP8 78 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PLPPR5Q32ZL2 321 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF791Q3KP31 576 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC25A35Q3KQZ1 300 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TRMT12Q53H54 448 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 BEX5Q5H9J7 111 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C6orf226Q5I0X4 101 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SOHLH1Q5JUK2 328 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NCMAPQ5T1S8 102 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PRAMEF5Q5TYX0 476 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 GPR107Q5VW38 600 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PRAMEF6Q5VXH4 476 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PDPK2PQ6A1A2 396 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CLEC6AQ6EIG7 209 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 H3F3CQ6NXT2 135 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TNFAIP8L2Q6P589 184 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RNASEKQ6P5S7 137 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 XKRXQ6PP77 449 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SASS6Q6UVJ0 657 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CLEC2AQ6UVW9 174 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NTM-AS1Q6ZSK4 140 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 FAM43BQ6ZT52 329 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 BHLHA15Q7RTS1 189 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 COMMD6Q7Z4G1 85 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 WDR86Q86TI4 376 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MARCH3Q86UD3 253 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NKAIN4Q8IVV8 208 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CTAGE3PQ8IX95 158 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 KATNAL2Q8IYT4 538 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 MICU2Q8IYU8 434 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR5AS1Q8N127 324 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 GABRG1Q8N1C3 465 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC75A-AS1Q8N1F1 130 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OSR2Q8N2R0 312 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C10orf111Q8N326 155 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 LRRC25Q8N386 305 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CBR4Q8N4T8 237 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TEX9Q8N6V9 391 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CLDN22Q8N7P3 220 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C3orf56Q8N813 242 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 FBXO36Q8NEA4 188 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NOXO1Q8NFA2 376 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 STEAP2Q8NFT2 490 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TTLQ8NG68 377 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR2M3Q8NG83 312 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR10AD1Q8NGE0 317 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR52M1Q8NGK5 317 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR8J1Q8NGP2 316 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR1S2Q8NGQ3 325 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR1J4Q8NGS1 313 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR10J6PQ8NGY7 276 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 OR1P1Q8NH06 330 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF420Q8TAQ5 688 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 PLPPR1Q8TBJ4 325 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NT5CQ8TCD5 201 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C10orf105Q8TEF2 133 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 C17orf50Q8WW18 174 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 APH1BQ8WW43 257 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC7A6Q92536 515 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RORBQ92753 470 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CDS1Q92903 461 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RAB8BQ92930 207 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 RAD51AP1Q96B01 352 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 TRIM44Q96DX7 344 aaPredicted RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SEH1LQ96EE3 360 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 NARS2Q96I59 477 aaKnown RBP0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ARL5BQ96KC2 179 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 SLC35G5Q96KT7 338 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 ZNF681Q96N22 645 aa0.58□□□□□ -2.32
SMARCB1-209ENST00000635578 CYTH2Q99418 400 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms